RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 PSKH2Q96QS6 385 aa13.13□□□□□ -0.31
CTC1-205ENST00000578537 CINPQ9BW66 212 aaPredicted RBP13.13□□□□□ -0.31
CTC1-205ENST00000578537 ANKZF1Q9H8Y5 726 aa13.13□□□□□ -0.31
CTC1-205ENST00000578537 ETNK1Q9HBU6 452 aa13.13□□□□□ -0.31
CTC1-205ENST00000578537 GLOD4Q9HC38 313 aa13.13□□□□□ -0.31
CTC1-205ENST00000578537 C2orf42Q9NWW7 574 aa13.13□□□□□ -0.31
CTC1-205ENST00000578537 UBP1Q9NZI7 540 aa13.13□□□□□ -0.31
CTC1-205ENST00000578537 THAP10Q9P2Z0 257 aaPredicted RBP13.13□□□□□ -0.31
CTC1-205ENST00000578537 SEPT3Q9UH03 358 aa13.13□□□□□ -0.31
CTC1-205ENST00000578537 HPCAL4Q9UM19 191 aa13.13□□□□□ -0.31
CTC1-205ENST00000578537 DOCK9Q9BZ29 2069 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 ZNF106Q9H2Y7 1883 aaKnown RBP13.12□□□□□ -0.31
CTC1-205ENST00000578537 FAM187AA6NFU0 413 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 MTSS1O43312 755 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 OPHN1O60890 802 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 ADAM23O75077 832 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 PDGFBP01127 241 aaPredicted RBP13.12□□□□□ -0.31
CTC1-205ENST00000578537 ASLP04424 464 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 CTSLP07711 333 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 STIP1P31948 543 aaKnown RBP13.12□□□□□ -0.31
CTC1-205ENST00000578537 METAP1P53582 386 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 RHOAP61586 193 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 SKOR1P84550 965 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 SULT2A1Q06520 285 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 GPS1Q13098 491 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 FZD5Q13467 585 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 ENPP2Q13822 863 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 SPARCL1Q14515 664 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 PPP1R7Q15435 360 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 FNDC3BQ53EP0 1204 aaKnown RBP13.12□□□□□ -0.31
CTC1-205ENST00000578537 INO80DQ53TQ3 878 aaPredicted RBP13.12□□□□□ -0.31
CTC1-205ENST00000578537 DUPD1Q68J44 220 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 RETSATQ6NUM9 610 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 KDELC1Q6UW63 502 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 ZDHHC24Q6UX98 284 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 ARHGEF18Q6ZSZ5 1173 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 ZNF534Q76KX8 674 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 PID1Q7Z2X4 250 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 GSPT2Q8IYD1 628 aaKnown RBP13.12□□□□□ -0.31
CTC1-205ENST00000578537 SIX5Q8N196 739 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 ZNF513Q8N8E2 541 aaPredicted RBP13.12□□□□□ -0.31
CTC1-205ENST00000578537 CCDC89Q8N998 374 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 GRK7Q8WTQ7 553 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 CASKIN2Q8WXE0 1202 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 CPT1BQ92523 772 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 PTPRN2Q92932 1015 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 PWWP2AQ96N64 755 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 SMIM14Q96QK8 99 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 RBM15Q96T37 977 aaKnown RBP eCLIP13.12□□□□□ -0.31
CTC1-205ENST00000578537 SEMA3CQ99985 751 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 CD248Q9HCU0 757 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 LTB4R2Q9NPC1 389 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 ASIC3Q9UHC3 531 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 RSPH14Q9UHP6 348 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 EVLQ9UI08 416 aaPredicted RBP13.12□□□□□ -0.31
CTC1-205ENST00000578537 SNX24Q9Y343 169 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 CACNA1HO95180 2353 aa13.12□□□□□ -0.31
CTC1-205ENST00000578537 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.11□□□□□ -0.31
CTC1-205ENST00000578537 DNALI1O14645 258 aaPredicted RBP13.11□□□□□ -0.31
CTC1-205ENST00000578537 BNIP3LO60238 219 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 RNF40O75150 1001 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 SIN3BO75182 1162 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 PIGNO95427 931 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 GAS8O95995 478 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 SRPRAP08240 638 aaKnown RBP13.11□□□□□ -0.31
CTC1-205ENST00000578537 CHRNB1P11230 501 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 ECHS1P30084 290 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 CD86P42081 329 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 GRIA1P42261 906 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 VASPP50552 380 aaPredicted RBP13.11□□□□□ -0.31
CTC1-205ENST00000578537 RENBPP51606 427 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 CCNHP51946 323 aaPredicted RBP13.11□□□□□ -0.31
CTC1-205ENST00000578537 TRAF2Q12933 501 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 SEMA5AQ13591 1074 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 GAS6Q14393 721 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 KCNJ11Q14654 390 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 RFTN1Q14699 578 aaPredicted RBP13.11□□□□□ -0.31
CTC1-205ENST00000578537 NUMA1Q14980 2115 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 PTPRRQ15256 657 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 ERCC6LQ2NKX8 1250 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 C2orf27AQ580R0 203 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 RNASEH2BQ5TBB1 312 aaKnown RBP13.11□□□□□ -0.31
CTC1-205ENST00000578537 IZUMO3Q5VZ72 239 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 KCTD11Q693B1 232 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 KIAA1211LQ6NV74 962 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 DPY19L3Q6ZPD9 716 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 MICALCLQ6ZW33 695 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 ZSWIM9Q86XI8 627 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 SUGP1Q8IWZ8 645 aaKnown RBP13.11□□□□□ -0.31
CTC1-205ENST00000578537 IL17RCQ8NAC3 791 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 OR2A12Q8NGT7 310 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 SEC14L1Q92503 715 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 IMP4Q96G21 291 aaKnown RBP13.11□□□□□ -0.31
CTC1-205ENST00000578537 FCRL5Q96RD9 977 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 VAT1Q99536 393 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 ERP44Q9BS26 406 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 NOD2Q9HC29 1040 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 RAB6BQ9NRW1 208 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 PAK5Q9P286 719 aa13.11□□□□□ -0.31
CTC1-205ENST00000578537 WNT16Q9UBV4 365 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms