RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 TSHRP16473 764 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 OAS2P29728 719 aaKnown RBP8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 RAD23BP54727 409 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 EIF3IQ13347 325 aaKnown RBP8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 DLG2Q15700 870 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 SGSM1Q2NKQ1 1148 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 FHL5Q5TD97 284 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 CXorf57Q6NSI4 855 aaKnown RBP8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 MSANTD2Q6P1R3 559 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 SLITRK4Q8IW52 837 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 LGI2Q8N0V4 545 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 Q8N9G6 341 aaPredicted RBP8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 PCDH19Q8TAB3 1148 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 TCTN2Q96GX1 697 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 HEXIM2Q96MH2 286 aaKnown RBP8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 KRTAP4-6Q9BYQ5 205 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 ETNK1Q9HBU6 452 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 RAB6BQ9NRW1 208 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 OLA1Q9NTK5 396 aaKnown RBP8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 NCKIPSDQ9NZQ3 722 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 GGT7Q9UJ14 662 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 NAALADL1Q9UQQ1 740 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 ABCA2Q9BZC7 2435 aa8.2□□□□□ -1.1
SLC46A1-201ENST00000578217 ZNF106Q9H2Y7 1883 aaKnown RBP8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 POLEQ07864 2286 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 EIF3DO15371 548 aaKnown RBP eCLIP8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 IRAK2O43187 625 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 MAN1A2O60476 641 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 EXOC3O60645 756 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 PCDH8O95206 1070 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 MOCS2O96007 188 aaPredicted RBP8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 ITGB7P26010 798 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 GPC1P35052 558 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 SLC11A2P49281 568 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 TBX4P57082 545 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 PFN3P60673 137 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 ARHGAP44Q17R89 818 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 GOLGA7BQ2TAP0 167 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 ACCSLQ4AC99 568 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 LACTB2Q53H82 288 aaPredicted RBP8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 FAM46CQ5VWP2 391 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 RNF219Q5W0B1 726 aaPredicted RBP8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 RAP1GAP2Q684P5 730 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 MAMDC2Q7Z304 686 aaPredicted RBP8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 ATCAYQ86WG3 371 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 CCDC65Q8IXS2 484 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 PHACTR4Q8IZ21 702 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 PDILTQ8N807 584 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 TAS1R2Q8TE23 839 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 RNF139Q8WU17 664 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 FUBP1Q96AE4 644 aaKnown RBP8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 SLC17A9Q9BYT1 436 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 UBXN6Q9BZV1 441 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 GRIP2Q9C0E4 1043 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 STRADBQ9C0K7 418 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 LRRN3Q9H3W5 708 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 APOBEC3BQ9UH17 382 aaKnown RBP8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 HS3ST3A1Q9Y663 406 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 RNF215Q9Y6U7 377 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 LRP4O75096 1905 aa8.19□□□□□ -1.1
SLC46A1-201ENST00000578217 PKDREJQ9NTG1 2253 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 TMEM229AB2RXF0 380 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 H3BM21 787 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 MEN1O00255 615 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 KPNA3O00505 521 aaPredicted RBP8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 SMAD6O43541 496 aaKnown RBP8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 ANXA6P08133 673 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 FGF3P11487 239 aaPredicted RBP8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 P4HA1P13674 534 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 UGT1A3P35503 534 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 STAT6P42226 847 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 PIK3CAP42336 1068 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 DAOAP59103 153 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 PITX1P78337 314 aaPredicted RBP8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 CENPCQ03188 943 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 PPP3CAQ08209 521 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 KLRB1Q12918 225 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 MRPL49Q13405 166 aaKnown RBP8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 DEFB109BQ30KR1 87 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 PRR30Q53SZ7 412 aaPredicted RBP8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 FAM26FQ5R3K3 315 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 ARHGAP17Q68EM7 881 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 NEK5Q6P3R8 708 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 FAM173BQ6P4H8 233 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 DCP2Q8IU60 420 aaKnown RBP8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 CCNJLQ8IV13 435 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 C12orf56Q8IXR9 622 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 UNC5BQ8IZJ1 945 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 ANKRD52Q8NB46 1076 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 RCBTB1Q8NDN9 531 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 OR2A12Q8NGT7 310 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 WDR48Q8TAF3 677 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 UBA3Q8TBC4 463 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 PDCD6IPQ8WUM4 868 aaKnown RBP8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 SEMA4DQ92854 862 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 SLC39A13Q96H72 371 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 NIF3L1Q9GZT8 377 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 CYP3A43Q9HB55 503 aa8.18□□□□□ -1.1
SLC46A1-201ENST00000578217 CASS4Q9NQ75 786 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms