RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 TP53INP2Q8IXH6 220 aa22.54■■□□□ 1.2
SMARCD2-206ENST00000577990 OR6K2Q8NGY2 324 aa22.54■■□□□ 1.2
SMARCD2-206ENST00000577990 PPP1R16AQ96I34 528 aa22.54■■□□□ 1.2
SMARCD2-206ENST00000577990 EDEM2Q9BV94 578 aa22.54■■□□□ 1.2
SMARCD2-206ENST00000577990 MIR1-1HGQ9H1L0 117 aa22.54■■□□□ 1.2
SMARCD2-206ENST00000577990 IPO11Q9UI26 975 aaKnown RBP22.54■■□□□ 1.2
SMARCD2-206ENST00000577990 REXO2Q9Y3B8 237 aaKnown RBP22.54■■□□□ 1.2
SMARCD2-206ENST00000577990 LNP1A1A4G5 178 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 RNF103O00237 685 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 PLRG1O43660 514 aaKnown RBP22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 SPOPO43791 374 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 CFIP05156 583 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 GNSP15586 552 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 COMTP21964 271 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 IL10RBQ08334 325 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 CCDC15Q0P6D6 951 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 MYLK3Q32MK0 819 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 ANKRD20A8PQ5CZ79 823 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 LRRC38Q5VT99 294 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 SLC23A3Q6PIS1 610 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 ACRBPQ8NEB7 543 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 RAPGEF5Q92565 580 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 BIRC7Q96CA5 298 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 FAF2Q96CS3 445 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 LRIG1Q96JA1 1093 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 NUSAP1Q9BXS6 441 aaKnown RBP22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 KDM4CQ9H3R0 1056 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 LHX3Q9UBR4 397 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 EIF2B4Q9UI10 523 aaKnown RBP22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 HYOU1Q9Y4L1 999 aa22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 ASCC3Q8N3C0 2202 aaKnown RBP22.53■■□□□ 1.2
SMARCD2-206ENST00000577990 RCCD1A6NED2 376 aa22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 KRIT1O00522 736 aa22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 BUB1BO60566 1050 aaPredicted RBP22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 POP4O95707 220 aaKnown RBP22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 IGHV4-34P06331 123 aa22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 KDELR1P24390 212 aa22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 ITGB7P26010 798 aa22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 GKP32189 559 aa22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 IRX4P78413 519 aa22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 PIP5KL1Q5T9C9 394 aa22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 ERN2Q76MJ5 926 aaKnown RBP22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 RHOT1Q8IXI2 618 aa22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 ZCCHC9Q8N567 271 aaKnown RBP22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 PCDH19Q8TAB3 1148 aa22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 HDAC8Q9BY41 377 aa22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 SLC6A14Q9UN76 642 aa22.52■■□□□ 1.2
SMARCD2-206ENST00000577990 EPG5Q9HCE0 2579 aa22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 A0A1B0GTW7 788 aa22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 LRRD1A4D1F6 860 aa22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 C10orf142B7Z368 130 aa22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 PALMO75781 387 aa22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 SERPINF2P08697 491 aa22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 GSDMDP57764 484 aa22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 RAD51Q06609 339 aa22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 RFTN1Q14699 578 aaPredicted RBP22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 PAFAH1B3Q15102 231 aaKnown RBP22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 NCBP2-AS2Q69YL0 99 aa22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 ATPAF2Q8N5M1 289 aa22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 EXOC2Q96KP1 924 aa22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 OSBPL1AQ9BXW6 950 aa22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 CAPN10Q9HC96 672 aa22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 CACNA1EQ15878 2313 aa22.51■■□□□ 1.19
SMARCD2-206ENST00000577990 TBC1D3DA0A087WVF3 549 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 TBC1D3IA0A087WXS9 549 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 TBC1D3EA0A087X179 549 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 TBC1D3KA0A087X1G2 549 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 TBC1D3FA6NER0 549 aaPredicted RBP22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 TBC1D3LB9A6J9 549 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 TM4SF5O14894 197 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 BCAT2O15382 392 aaPredicted RBP22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 MFSD11O43934 449 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 KRT1P04264 644 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 TBC1D3HP0C7X1 549 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 TNNT1P13805 278 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 CD27P26842 260 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 CCR5P51681 352 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 NEK3P51956 506 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 VAV2P52735 878 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 TMCO4Q5TGY1 634 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 TBC1D3GQ6DHY5 549 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 TBC1D3CQ6IPX1 549 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 C11orf63Q6NUN7 778 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 TBC1D3Q8IZP1 549 aaPredicted RBP22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 C1orf216Q8TAB5 229 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 VOPP1Q96AW1 172 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 ZNF599Q96NL3 588 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 CINPQ9BW66 212 aaPredicted RBP22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 DDX56Q9NY93 547 aaKnown RBP22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 SALL4Q9UJQ4 1053 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 TPX2Q9ULW0 747 aaKnown RBP22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 ALG6Q9Y672 507 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 CEP295Q9C0D2 2601 aa22.5■■□□□ 1.19
SMARCD2-206ENST00000577990 C4orf47A7E2U8 309 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 BTNL10A8MVZ5 291 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 ZNF487B1APH4 448 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 PSTPIP1O43586 416 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 UGT2B4P06133 528 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 TAS2R38P59533 333 aa22.49■■□□□ 1.19
SMARCD2-206ENST00000577990 PPP2CBP62714 309 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms