RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 KLHDC8BQ8IXV7 354 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 MAML2Q8IZL2 1156 aaPredicted RBP12.88□□□□□ -0.35
MKS1-206ENST00000577824 DTWD2Q8NBA8 298 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 TMIEQ8NEW7 156 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 LRRN4Q8WUT4 740 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 OR8D1Q8WZ84 308 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 TADA1Q96BN2 335 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 TEKT5Q96M29 485 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 TUBGCP5Q96RT8 1024 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 FAM129BQ96TA1 746 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 FERMT1Q9BQL6 677 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 CPEB1Q9BZB8 566 aaKnown RBP12.88□□□□□ -0.35
MKS1-206ENST00000577824 MKRN2Q9H000 416 aaKnown RBP12.88□□□□□ -0.35
MKS1-206ENST00000577824 MTG2Q9H4K7 406 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 RBM22Q9NW64 420 aaKnown RBP eCLIP12.88□□□□□ -0.35
MKS1-206ENST00000577824 SMARCAL1Q9NZC9 954 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 EBF1Q9UH73 591 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 FBXO4Q9UKT5 387 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 TRHDEQ9UKU6 1024 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 PPM1HQ9ULR3 514 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 SCML1Q9UN30 329 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 DRG1Q9Y295 367 aaKnown RBP12.88□□□□□ -0.35
MKS1-206ENST00000577824 SHROOM3Q8TF72 1996 aa12.88□□□□□ -0.35
MKS1-206ENST00000577824 ZNF318Q5VUA4 2279 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 GOLGA6L10A0A0M3HER8 536 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 TCRBV21S2A2A0A5A6 115 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 C5orf60A6NFR6 353 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 PDE2AO00408 941 aaPredicted RBP12.87□□□□□ -0.35
MKS1-206ENST00000577824 OPHN1O60890 802 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 PHF2O75151 1096 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 SOCS5O75159 536 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 APBB3O95704 486 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 IGLV3-19P01714 112 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 PRNPP04156 253 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 GABRG2P18507 467 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 NDUFV2P19404 249 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 STIP1P31948 543 aaKnown RBP12.87□□□□□ -0.35
MKS1-206ENST00000577824 RECQLP46063 649 aaPredicted RBP12.87□□□□□ -0.35
MKS1-206ENST00000577824 GDF10P55107 478 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 TUBB2AQ13885 445 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 MYLK3Q32MK0 819 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 P3H1Q32P28 736 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 ATXN7L2Q5T6C5 722 aaPredicted RBP12.87□□□□□ -0.35
MKS1-206ENST00000577824 ZNF776Q68DI1 518 aaPredicted RBP12.87□□□□□ -0.35
MKS1-206ENST00000577824 DARS2Q6PI48 645 aaKnown RBP12.87□□□□□ -0.35
MKS1-206ENST00000577824 ZNF567Q8N184 647 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 STK40Q8N2I9 435 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 CHST14Q8NCH0 376 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 MDGA1Q8NFP4 955 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 ARRDC2Q8TBH0 407 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 C1orf54Q8WWF1 131 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 SLCO2A1Q92959 643 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 EXOC2Q96KP1 924 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 MRGPRX1Q96LB2 322 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 SPATA13Q96N96 652 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 HEPHQ9BQS7 1158 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 TMEM121Q9BTD3 319 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 TUBB2BQ9BVA1 445 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 OSBPL1AQ9BXW6 950 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 NT5MQ9NPB1 228 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 POLR3BQ9NW08 1133 aaPredicted RBP12.87□□□□□ -0.35
MKS1-206ENST00000577824 USP36Q9P275 1121 aaKnown RBP12.87□□□□□ -0.35
MKS1-206ENST00000577824 HECAQ9UBI9 543 aaPredicted RBP12.87□□□□□ -0.35
MKS1-206ENST00000577824 IL36AQ9UHA7 158 aa12.87□□□□□ -0.35
MKS1-206ENST00000577824 FARP1Q9Y4F1 1045 aaPredicted RBP12.87□□□□□ -0.35
MKS1-206ENST00000577824 MYO18AQ92614 2054 aaKnown RBP12.87□□□□□ -0.35
MKS1-206ENST00000577824 PLXND1Q9Y4D7 1925 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 TSPAN11A1L157 253 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 CCDC188H7C350 402 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 KRIT1O00522 736 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 INSIG1O15503 277 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 KCNN4O15554 427 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 HTRA2O43464 458 aaPredicted RBP12.86□□□□□ -0.35
MKS1-206ENST00000577824 RNASEH1O60930 286 aaKnown RBP12.86□□□□□ -0.35
MKS1-206ENST00000577824 GCATO75600 419 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 ALDH1A2O94788 518 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 POP4O95707 220 aaKnown RBP12.86□□□□□ -0.35
MKS1-206ENST00000577824 ADH1BP00325 375 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 JCHAINP01591 159 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 MMP2P08253 660 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 CHRNA3P32297 505 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 CD68P34810 354 aaPredicted RBP12.86□□□□□ -0.35
MKS1-206ENST00000577824 RPS14P62263 151 aaKnown RBP12.86□□□□□ -0.35
MKS1-206ENST00000577824 ZNF528Q3MIS6 628 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 TTC27Q6P3X3 843 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 NCEH1Q6PIU2 408 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 B4GALNT4Q76KP1 1039 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 SRLQ86TD4 932 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 TSTD1Q8NFU3 115 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 KIF18AQ8NI77 898 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 HCAR2Q8TDS4 363 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 NELL1Q92832 810 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 ECHDC3Q96DC8 303 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 IMP4Q96G21 291 aaKnown RBP12.86□□□□□ -0.35
MKS1-206ENST00000577824 CAPZA3Q96KX2 299 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 NSMCE3Q96MG7 304 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 ZNF641Q96N77 438 aaPredicted RBP12.86□□□□□ -0.35
MKS1-206ENST00000577824 HHIPQ96QV1 700 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 AP1M1Q9BXS5 423 aa12.86□□□□□ -0.35
MKS1-206ENST00000577824 SLC25A51Q9H1U9 297 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms