RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 LINC00597Q9H2U6 94 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 SMOC1Q9H4F8 434 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 HEBP1Q9NRV9 189 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 TDP1Q9NUW8 608 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 PLK2Q9NYY3 685 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 WHRNQ9P202 907 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 PAK5Q9P286 719 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 KLHL8Q9P2G9 620 aaPredicted RBP10.26□□□□□ -0.77
CRLF3-202ENST00000577725 IPO11Q9UI26 975 aaKnown RBP10.26□□□□□ -0.77
CRLF3-202ENST00000577725 STOML2Q9UJZ1 356 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 CDH7Q9ULB5 785 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 CLEC4EQ9ULY5 219 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 NDRG2Q9UN36 371 aaKnown RBP10.26□□□□□ -0.77
CRLF3-202ENST00000577725 ACTL7AQ9Y615 435 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 RAD54BQ9Y620 910 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 WNT6Q9Y6F9 365 aa10.26□□□□□ -0.77
CRLF3-202ENST00000577725 CHD5Q8TDI0 1954 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 E2F8A0AVK6 867 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 C5orf60A6NFR6 353 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 ARHGAP42A6NI28 874 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 J3KR12 359 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 MAN2B1O00754 1011 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 MAFKO60675 156 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 GCATO75600 419 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 TMEM63AO94886 807 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 ITIH2P19823 946 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 GLDCP23378 1020 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 PSMB4P28070 264 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 STIP1P31948 543 aaKnown RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 MPLP40238 635 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 NDST2P52849 883 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 DRG2P55039 364 aaKnown RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 GNA12Q03113 381 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 ZNF177Q13360 481 aaPredicted RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 POLD3Q15054 466 aaPredicted RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 FSCBQ5H9T9 825 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 FAM78AQ5JUQ0 283 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 UBAP2Q5T6F2 1119 aaKnown RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 ACBD5Q5T8D3 534 aaPredicted RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 RNF219Q5W0B1 726 aaPredicted RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 CXorf57Q6NSI4 855 aaKnown RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 HIBCHQ6NVY1 386 aaPredicted RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 RHBDF2Q6PJF5 856 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 ARHGEF18Q6ZSZ5 1173 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 CHST9Q7L1S5 443 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 CCDC25Q86WR0 208 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 TSEN2Q8NCE0 465 aaKnown RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 CCHCR1Q8TD31 782 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 DDI1Q8WTU0 396 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 CPT1BQ92523 772 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 FGF13Q92913 245 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 ARHGEF2Q92974 986 aaKnown RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 TMA16Q96EY4 203 aaKnown RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 ZNF419Q96HQ0 510 aaPredicted RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 AGAP3Q96P47 875 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 UBL7Q96S82 380 aaPredicted RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 FMO2Q99518 471 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 SP110Q9HB58 689 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 ETNK1Q9HBU6 452 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 SCUBE2Q9NQ36 999 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 RAB6BQ9NRW1 208 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 ZNF446Q9NWS9 450 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 TPX2Q9ULW0 747 aaKnown RBP10.25□□□□□ -0.77
CRLF3-202ENST00000577725 ZNF510Q9Y2H8 683 aa10.25□□□□□ -0.77
CRLF3-202ENST00000577725 A0A1B0GVM2 712 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 FAM221BA6H8Z2 402 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 TCAF2A6NFQ2 919 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 SHISA7A6NL88 538 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 H0Y626 953 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 J3QKU1 62 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 ZBTB24O43167 697 aaPredicted RBP10.24□□□□□ -0.77
CRLF3-202ENST00000577725 SNAP91O60641 907 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 CLDN11O75508 207 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 BANF1O75531 89 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 STK10O94804 968 aaKnown RBP10.24□□□□□ -0.77
CRLF3-202ENST00000577725 LUC7L3O95232 432 aaKnown RBP10.24□□□□□ -0.77
CRLF3-202ENST00000577725 PAPSS2O95340 614 aaPredicted RBP10.24□□□□□ -0.77
CRLF3-202ENST00000577725 HLA-DQB2P05538 268 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 TUBBP07437 444 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 NFKB1P19838 968 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 HOXD9P28356 352 aaPredicted RBP10.24□□□□□ -0.77
CRLF3-202ENST00000577725 MZF1P28698 734 aaPredicted RBP10.24□□□□□ -0.77
CRLF3-202ENST00000577725 CD68P34810 354 aaPredicted RBP10.24□□□□□ -0.77
CRLF3-202ENST00000577725 ACTN2P35609 894 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 ETFBP38117 255 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 CSKP41240 450 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 MTM1Q13496 603 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 SERINC3Q13530 473 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 MAP9Q49MG5 647 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 TRIM68Q6AZZ1 485 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 PID1Q7Z2X4 250 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 TMEM25Q86YD3 366 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 SPEM1Q8N4L4 309 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 SLC39A7Q92504 469 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 PRCCQ92733 491 aaPredicted RBP10.24□□□□□ -0.77
CRLF3-202ENST00000577725 TSGA13Q96PP4 275 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 KXD1Q9BQD3 176 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 GORASP1Q9BQQ3 440 aa10.24□□□□□ -0.77
CRLF3-202ENST00000577725 BRD8Q9H0E9 1235 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms