RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ITM2AO43736 263 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 TSC22D2O75157 780 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 XRCC1P18887 633 aaPredicted RBP13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 NOS2P35228 1153 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 SLC26A2P50443 739 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 TCEAL1Q15170 157 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 SHROOM1Q2M3G4 852 aaPredicted RBP13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 PGS1Q32NB8 556 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 MSS51Q4VC12 460 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 DAW1Q8N136 415 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 ZBTB8BQ8NAP8 495 aaPredicted RBP13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 WNT8BQ93098 351 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 ADI1Q9BV57 179 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 DEFB129Q9H1M3 183 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 PNPLA8Q9NP80 782 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 SMPD3Q9NY59 655 aaPredicted RBP13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 TRAF6Q9Y4K3 522 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 SNPHO15079 494 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 TADA2AO75478 443 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 LTFP02788 710 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 CPB1P15086 417 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 LSAMPQ13449 338 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 CAPSQ13938 189 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 PDCD4Q53EL6 469 aaKnown RBP13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 MARC1Q5VT66 337 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 ZNF410Q86VK4 478 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 DENND1AQ8TEH3 1009 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 TRAPPC12Q8WVT3 735 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 EPB41L1Q9H4G0 881 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 TAS2R13Q9NYV9 303 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 FBXO5Q9UKT4 447 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 PCDHGC3Q9UN70 934 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 MYH2Q9UKX2 1941 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 KRT20P35900 424 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 GAD2Q05329 585 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 ARHGAP36Q6ZRI8 547 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 FRMD7Q6ZUT3 714 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 CUZD1Q86UP6 607 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 CLYBLQ8N0X4 340 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 PDPRQ8NCN5 879 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 HM13Q8TCT9 377 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 DGKBQ9Y6T7 804 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 RECQL5O94762 991 aaPredicted RBP13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 DBTP11182 482 aaKnown RBP13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 PRIM2P49643 509 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 LIMK2P53671 638 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 APOBEC3GQ9HC16 384 aaKnown RBP13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 PDGFCQ9NRA1 345 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 A0A0J9YYE9 177 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 CXorf49A8MYA2 514 aaPredicted RBP13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 CLDN25C9JDP6 229 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 PENKP01210 267 aaPredicted RBP13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 SLC2A3P11169 496 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 TCF4P15884 667 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 GTF2A2P52657 109 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 MFSD4BQ5TF39 518 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 AKAP14Q86UN6 197 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 LENG9Q96B70 501 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 RPRD1AQ96P16 312 aaPredicted RBP13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 ACO2Q99798 780 aaKnown RBP13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 HGH1Q9BTY7 390 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 MYOZ2Q9NPC6 264 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 SNTG2Q9NY99 539 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 PIM2Q9P1W9 311 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 INVSQ9Y283 1065 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 WDR37Q9Y2I8 494 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 SLC15A5A6NIM6 579 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 BBIP1A8MTZ0 92 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 CD3EAPO15446 510 aaKnown RBP13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 HOXB8P17481 243 aaPredicted RBP13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 RENBPP51606 427 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 CLCN5P51795 746 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 NRLP54845 237 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 CERCAMQ5T4B2 595 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 TXNRD3NBQ6F5E7 133 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 OFCC1Q8IZS5 231 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 LEMD2Q8NC56 503 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 C19orf18Q8NEA5 215 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 DNERQ8NFT8 737 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 UBASH3BQ8TF42 649 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 SENP6Q9GZR1 1112 aaPredicted RBP13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 DDX43Q9NXZ2 648 aaKnown RBP13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 NUDT5Q9UKK9 219 aa13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 GPC6Q9Y625 555 aaPredicted RBP13.24□□□□□ -0.29
PCDHGB3-201ENST00000576222 MYH15Q9Y2K3 1946 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 TPD52L2O43399 206 aaKnown RBP13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 CCNT2O60583 730 aaKnown RBP13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 TGFB3P10600 412 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 CDH13P55290 713 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 SLC9B1Q4ZJI4 515 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 AARS2Q5JTZ9 985 aaKnown RBP13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 UBAP2Q5T6F2 1119 aaKnown RBP13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 MICALL2Q8IY33 904 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 ZNF540Q8NDQ6 660 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 CENPNQ96H22 339 aaPredicted RBP13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 POPDC2Q9HBU9 364 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 FMN2Q9NZ56 1722 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 SLC25A27O95847 323 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 ERCC2P18074 760 aa13.23□□□□□ -0.29
PCDHGB3-201ENST00000576222 IL12AP29459 219 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms