RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ARNTP27540 789 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 IL10RBQ08334 325 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 SERINC3Q13530 473 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 ITGA9Q13797 1035 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 TTC7BQ86TV6 843 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 LGI2Q8N0V4 545 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 CFAP52Q8N1V2 620 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 PPP4R1Q8TF05 950 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 NMUR2Q9GZQ4 415 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 NMRAL1Q9HBL8 299 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 TREX1Q9NSU2 369 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 OGDHLQ9ULD0 1010 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 TTC24A2A3L6 582 aaPredicted RBP14.22□□□□□ -0.13
VPS33B-208ENST00000574755 HEATR9A2RTY3 570 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 FCHO1O14526 889 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 HNRNPCL1O60812 293 aaKnown RBP14.22□□□□□ -0.13
VPS33B-208ENST00000574755 GABRB3P28472 473 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 ACVRL1P37023 503 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 MAPKAPK2P49137 400 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 SERPINH1P50454 418 aaKnown RBP14.22□□□□□ -0.13
VPS33B-208ENST00000574755 YBEYP58557 167 aaPredicted RBP14.22□□□□□ -0.13
VPS33B-208ENST00000574755 MPP1Q00013 466 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 CDK18Q07002 472 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 RIPK1Q13546 671 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 ZNF470Q6ECI4 717 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 RFWD3Q6PCD5 774 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 ANKRD33Q7Z3H0 272 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 SUGP1Q8IWZ8 645 aaKnown RBP14.22□□□□□ -0.13
VPS33B-208ENST00000574755 TEX26Q8N6G2 289 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 TUBB6Q9BUF5 446 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 ARNT2Q9HBZ2 717 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 NOD2Q9HC29 1040 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 ARL8BQ9NVJ2 186 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 LNPEPQ9UIQ6 1025 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 DNAJC16Q9Y2G8 782 aa14.22□□□□□ -0.13
VPS33B-208ENST00000574755 A8MUI8 341 aa14.21□□□□□ -0.13
VPS33B-208ENST00000574755 PHGDHO43175 533 aaKnown RBP14.21□□□□□ -0.13
VPS33B-208ENST00000574755 MMP2P08253 660 aa14.21□□□□□ -0.13
VPS33B-208ENST00000574755 PTPN4P29074 926 aa14.21□□□□□ -0.13
VPS33B-208ENST00000574755 SLC1A2P43004 574 aa14.21□□□□□ -0.13
VPS33B-208ENST00000574755 HARS2P49590 506 aaKnown RBP14.21□□□□□ -0.13
VPS33B-208ENST00000574755 LBRQ14739 615 aaKnown RBP14.21□□□□□ -0.13
VPS33B-208ENST00000574755 HSF5Q4G112 596 aaPredicted RBP14.21□□□□□ -0.13
VPS33B-208ENST00000574755 SPOUT1Q5T280 376 aaKnown RBP14.21□□□□□ -0.13
VPS33B-208ENST00000574755 KIAA0930Q6ICG6 404 aaPredicted RBP14.21□□□□□ -0.13
VPS33B-208ENST00000574755 SLC39A5Q6ZMH5 540 aa14.21□□□□□ -0.13
VPS33B-208ENST00000574755 PDZD8Q8NEN9 1154 aa14.21□□□□□ -0.13
VPS33B-208ENST00000574755 UTP4Q969X6 686 aaKnown RBP14.21□□□□□ -0.13
VPS33B-208ENST00000574755 IGSF21Q96ID5 467 aa14.21□□□□□ -0.13
VPS33B-208ENST00000574755 RILPQ96NA2 401 aa14.21□□□□□ -0.13
VPS33B-208ENST00000574755 TSNARE1Q96NA8 513 aa14.21□□□□□ -0.13
VPS33B-208ENST00000574755 VN1R3Q9BXE9 311 aa14.21□□□□□ -0.13
VPS33B-208ENST00000574755 TBC1D10AQ9BXI6 508 aa14.21□□□□□ -0.13
VPS33B-208ENST00000574755 TASP1Q9H6P5 420 aa14.21□□□□□ -0.13
VPS33B-208ENST00000574755 SAGE1Q9NXZ1 904 aa14.21□□□□□ -0.13
VPS33B-208ENST00000574755 ARMCX1Q9P291 453 aa14.21□□□□□ -0.13
VPS33B-208ENST00000574755 UXTQ9UBK9 157 aaPredicted RBP14.21□□□□□ -0.13
VPS33B-208ENST00000574755 TRAFD1O14545 582 aaPredicted RBP14.2□□□□□ -0.14
VPS33B-208ENST00000574755 CCL5P13501 91 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 AVPR1AP37288 418 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 PGGT1BP53609 377 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 IKBKEQ14164 716 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 TRIM60Q495X7 471 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 SLC41A1Q8IVJ1 513 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 PGBD5Q8N414 524 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 SREK1Q8WXA9 508 aaKnown RBP14.2□□□□□ -0.14
VPS33B-208ENST00000574755 CEP295NLQ96MC4 621 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 SIKE1Q9BRV8 207 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 CWH43Q9H720 699 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 CD248Q9HCU0 757 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 ATP13A1Q9HD20 1204 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 CPSF2Q9P2I0 782 aaKnown RBP14.2□□□□□ -0.14
VPS33B-208ENST00000574755 ANKRD6Q9Y2G4 727 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 BACE2Q9Y5Z0 518 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 MKI67P46013 3256 aaKnown RBP14.2□□□□□ -0.14
VPS33B-208ENST00000574755 ACSL4O60488 711 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 GJB5O95377 273 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 EFEMP2O95967 443 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 SLC6A4P31645 630 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 SLC11A2P49281 568 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 ABCE1P61221 599 aaKnown RBP14.2□□□□□ -0.14
VPS33B-208ENST00000574755 TLE2Q04725 743 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 SLC12A1Q13621 1099 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 ZNF235Q14590 738 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 SNX30Q5VWJ9 437 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 NSL1Q96IY1 281 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 EBF4Q9BQW3 602 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 FAM167BQ9BTA0 163 aa14.2□□□□□ -0.14
VPS33B-208ENST00000574755 POLR1EQ9GZS1 481 aaKnown RBP14.2□□□□□ -0.14
VPS33B-208ENST00000574755 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.19□□□□□ -0.14
VPS33B-208ENST00000574755 FAM95CA0A1B0GW59 222 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 ZNF840PA6NDX5 716 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 G3V2L1 256 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 CHUKO15111 745 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 PRAMEF11O60813 436 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 CCDC22O60826 627 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 SLC35E2BP0CK96 405 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 CALB2P22676 271 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 CSRP3P50461 194 aa14.19□□□□□ -0.14
VPS33B-208ENST00000574755 TNK2Q07912 1038 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms