RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 NOD2Q9HC29 1040 aa24.38■■□□□ 1.49
ATPAF1-213ENST00000574428 EIF2B3Q9NR50 452 aaKnown RBP24.38■■□□□ 1.49
ATPAF1-213ENST00000574428 MTRF1LQ9UGC7 380 aaKnown RBP24.38■■□□□ 1.49
ATPAF1-213ENST00000574428 TBC1D3BA6NDS4 549 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 PMPCBO75439 489 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 ANXA9O76027 345 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 KAT7O95251 611 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 AP2A1O95782 977 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 ATP5BP06576 529 aaKnown RBP24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 DLDP09622 509 aaKnown RBP24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 PTPRNQ16849 979 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 ACCSLQ4AC99 568 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 DGKKQ5KSL6 1271 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 KCTD11Q693B1 232 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 ZCCHC9Q8N567 271 aaKnown RBP24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 AENQ8WTP8 325 aaKnown RBP24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 GDAP1L1Q96MZ0 367 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 FBRSL1Q9HCM7 1045 aaKnown RBP24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 TRPV5Q9NQA5 729 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 HEBP1Q9NRV9 189 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 AAR2Q9Y312 384 aaKnown RBP24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 SPECC1L-ADORA2AF8WAN1 911 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 USP12O75317 370 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 ZNF821O75541 412 aaPredicted RBP24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 ASLP04424 464 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 CR2P20023 1033 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 GRIA1P42261 906 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 SKOR1P84550 965 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 C22orf39Q6P5X5 142 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 METTL3Q86U44 580 aaKnown RBP24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 CCDC25Q86WR0 208 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 KLHDC8BQ8IXV7 354 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 IPMKQ8NFU5 416 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 NSMCE3Q96MG7 304 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 SCUBE2Q9NQ36 999 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 PIAS3Q9Y6X2 628 aa24.37■■□□□ 1.49
ATPAF1-213ENST00000574428 GOLGA6CA6NDK9 693 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 GOLGA6BA6NDN3 693 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 GOLGA6DP0CG33 693 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 CTHP32929 405 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 GRIA2P42262 883 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 GEMP55040 296 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 EIF4HQ15056 248 aaKnown RBP24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 DLG2Q15700 870 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 PCSK7Q16549 785 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 TXNDC11Q6PKC3 985 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 OR6K2Q8NGY2 324 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 DNASE1L2Q92874 299 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 PPP1R2P1Q96PQ5 205 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 NUDCD1Q96RS6 583 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 P2RY13Q9BPV8 354 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 APOL2Q9BQE5 337 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 GOLGA6AQ9NYA3 693 aa24.36■■□□□ 1.49
ATPAF1-213ENST00000574428 SMAPO00193 183 aa24.35■■□□□ 1.49
ATPAF1-213ENST00000574428 INSIG1O15503 277 aa24.35■■□□□ 1.49
ATPAF1-213ENST00000574428 GALK1P51570 392 aa24.35■■□□□ 1.49
ATPAF1-213ENST00000574428 TDGQ13569 410 aa24.35■■□□□ 1.49
ATPAF1-213ENST00000574428 IER5LQ5T953 404 aa24.35■■□□□ 1.49
ATPAF1-213ENST00000574428 KDELC1Q6UW63 502 aa24.35■■□□□ 1.49
ATPAF1-213ENST00000574428 ZNF534Q76KX8 674 aa24.35■■□□□ 1.49
ATPAF1-213ENST00000574428 KDELC2Q7Z4H8 507 aa24.35■■□□□ 1.49
ATPAF1-213ENST00000574428 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.35■■□□□ 1.49
ATPAF1-213ENST00000574428 TADA1Q96BN2 335 aa24.35■■□□□ 1.49
ATPAF1-213ENST00000574428 MYO19Q96H55 970 aa24.35■■□□□ 1.49
ATPAF1-213ENST00000574428 SERPINB12Q96P63 405 aa24.35■■□□□ 1.49
ATPAF1-213ENST00000574428 LRRC40Q9H9A6 602 aa24.35■■□□□ 1.49
ATPAF1-213ENST00000574428 PIH1D1Q9NWS0 290 aaKnown RBP24.35■■□□□ 1.49
ATPAF1-213ENST00000574428 THEGQ9P2T0 379 aa24.35■■□□□ 1.49
ATPAF1-213ENST00000574428 ANTXRLA6NF34 631 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 ERI2A8K979 691 aaKnown RBP24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 TTC34A8MYJ7 566 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 ATP8B1O43520 1251 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 AVILO75366 819 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 APODP05090 189 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 SRPRAP08240 638 aaKnown RBP24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 WNT3AP56704 352 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 CDK16Q00536 496 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 NSUN2Q08J23 767 aaKnown RBP eCLIP24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 MPP3Q13368 585 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 HIF1AQ16665 826 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 FNBP1LQ5T0N5 605 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 CAND1Q86VP6 1230 aaKnown RBP24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 ADHFE1Q8IWW8 467 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 MCUQ8NE86 351 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 FICDQ9BVA6 458 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 FUT8Q9BYC5 575 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 CEP44Q9C0F1 390 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 PLA2G4CQ9UP65 541 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 TIMM44O43615 452 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 ATP9BO43861 1147 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 BNIP3LO60238 219 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 SASH3O75995 380 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 SUN1O94901 812 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 SERPINF2P08697 491 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 ZP2Q05996 745 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 MAP9Q49MG5 647 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 PREPLQ4J6C6 727 aaPredicted RBP24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 ISG20Q96AZ6 181 aaKnown RBP24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 MRGPRX2Q96LB1 330 aa24.34■■□□□ 1.49
ATPAF1-213ENST00000574428 FSD1LQ9BXM9 530 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms