RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 ANKRD11Q6UB99 2663 aaPredicted RBP9.82□□□□□ -0.84
NPLOC4-212ENST00000573328 DSPP15924 2871 aaKnown RBP9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 FAM149AA5PLN7 773 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 FAM221BA6H8Z2 402 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 SRRM3A6NNA2 597 aaPredicted RBP9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 A6NNZ2 444 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 C10orf142B7Z368 130 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 FGF10O15520 208 aaPredicted RBP9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 ZNF821O75541 412 aaPredicted RBP9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 RFPL3O75679 317 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 TMCC1O94876 653 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 GSRP00390 522 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 HNF1BP35680 557 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 AIF1P55008 147 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 CLDN2P57739 230 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 RHOAP61586 193 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 RPS21P63220 83 aaKnown RBP9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 SGCGQ13326 291 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 ATXN7L2Q5T6C5 722 aaPredicted RBP9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 SFMBT2Q5VUG0 894 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 CCNI2Q6ZMN8 369 aaPredicted RBP9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 TMPRSS7Q7RTY8 843 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 RTL3Q8N8U3 475 aaKnown RBP9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 TMEM145Q8NBT3 493 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 OR13H1Q8NG92 308 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 OR2AP1Q8NGE2 309 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 MDM1Q8TC05 714 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 BAP1Q92560 729 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 ISG20Q96AZ6 181 aaKnown RBP9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 FEM1CQ96JP0 617 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 GDAP1L1Q96MZ0 367 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 KLHL32Q96NJ5 620 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 OSBPL1AQ9BXW6 950 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 SLC17A9Q9BYT1 436 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 PARVAQ9NVD7 372 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 GPATCH2LQ9NWQ4 482 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 TAS2R14Q9NYV8 317 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 AP4E1Q9UPM8 1137 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 ZFR2Q9UPR6 939 aaKnown RBP9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 ADAMTS20P59510 1910 aa9.81□□□□□ -0.84
NPLOC4-212ENST00000573328 CHD6Q8TD26 2715 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 CXorf51AA0A1B0GTR3 108 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 TCRBV5S1A1TA0A578 114 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 C16orf96A6NNT2 1141 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 RASA4BC9J798 803 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 EEF2KO00418 725 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 FFAR2O15552 330 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 DAPK3O43293 454 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 RASA4O43374 803 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 KDELR3O43731 214 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 RNF8O76064 485 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 POP4O95707 220 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 CD160O95971 181 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 XPAP23025 273 aaPredicted RBP9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 RXRGP48443 463 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 YBEYP58557 167 aaPredicted RBP9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 DAB2P98082 770 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 KLHL30Q0D2K2 578 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 PARP15Q460N3 678 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 TMEM259Q4ZIN3 620 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 TDRD12Q587J7 1177 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 ZNF805Q5CZA5 627 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 LRRC73Q5JTD7 316 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 PPP1R15BQ5SWA1 713 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 CFAP58Q5T655 872 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 GCNT7Q6ZNI0 430 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 IRF2BP2Q7Z5L9 587 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 DNAAF5Q86Y56 855 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 MARCH9Q86YJ5 346 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 PAF1Q8N7H5 531 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 NETO2Q8NC67 525 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 CASKIN2Q8WXE0 1202 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 RAB7BQ96AH8 199 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 ZNF653Q96CK0 615 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 ARHGEF26Q96DR7 871 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 HMCESQ96FZ2 354 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 LRIG1Q96JA1 1093 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 VCPIP1Q96JH7 1222 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 EXOC2Q96KP1 924 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 DHX35Q9H5Z1 703 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 HAUS4Q9H6D7 363 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 DNAJC28Q9NX36 388 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 DONSONQ9NYP3 566 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 UBA2Q9UBT2 640 aaPredicted RBP9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 PCSK1NQ9UHG2 260 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 IPO11Q9UI26 975 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 ITM2BQ9Y287 266 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 FADS3Q9Y5Q0 445 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 SCINQ9Y6U3 715 aa9.8□□□□□ -0.84
NPLOC4-212ENST00000573328 ACACAQ13085 2346 aa9.79□□□□□ -0.84
NPLOC4-212ENST00000573328 NBEAQ8NFP9 2946 aa9.79□□□□□ -0.84
NPLOC4-212ENST00000573328 A0A1B0GTH6 734 aa9.79□□□□□ -0.84
NPLOC4-212ENST00000573328 A0A1W2PQC6 194 aa9.79□□□□□ -0.84
NPLOC4-212ENST00000573328 SYCE3A1L190 88 aa9.79□□□□□ -0.84
NPLOC4-212ENST00000573328 FPGTO14772 594 aa9.79□□□□□ -0.84
NPLOC4-212ENST00000573328 TSPAN6O43657 245 aa9.79□□□□□ -0.84
NPLOC4-212ENST00000573328 AP1G1O43747 822 aa9.79□□□□□ -0.84
NPLOC4-212ENST00000573328 PRPSAP2O60256 369 aa9.79□□□□□ -0.84
NPLOC4-212ENST00000573328 DKK1O94907 266 aa9.79□□□□□ -0.84
NPLOC4-212ENST00000573328 PAK4O96013 591 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms