RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 FRS2Q8WU20 508 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 BIRC7Q96CA5 298 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 NAP1L5Q96NT1 182 aaPredicted RBP7.62□□□□□ -1.19
NUP88-205ENST00000572809 SELENOOQ9BVL4 669 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 PABPC3Q9H361 631 aaKnown RBP7.62□□□□□ -1.19
NUP88-205ENST00000572809 SLC32A1Q9H598 525 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 ZFP64Q9NPA5 681 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 MPP6Q9NZW5 540 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 VPS28Q9UK41 221 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 MYO6Q9UM54 1294 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 CACNA1AO00555 2505 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 DCHS1Q96JQ0 3298 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 DNAH14Q0VDD8 3507 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 A0A0D9SEW6 157 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 A0A1W2PP55 124 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 A0A1W2PQC6 194 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 ILVBLA1L0T0 632 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 ANKRD62A6NC57 917 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 FAM47DPA6NHR8 397 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 LRRC72A6NJI9 287 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 C2CD4BA6NLJ0 364 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 UPK3BL1B0FP48 263 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 UPK3BL2E5RIL1 263 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 MCF2LO15068 1137 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 RNASEH2AO75792 299 aaKnown RBP7.61□□□□□ -1.19
NUP88-205ENST00000572809 SASH3O75995 380 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 FSBPO95073 299 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 GJB6O95452 261 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 VAV1P15498 845 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 GOT1P17174 413 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 PTPN9P43378 593 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 GSCP56915 257 aaPredicted RBP7.61□□□□□ -1.19
NUP88-205ENST00000572809 SEMA3BQ13214 749 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 SLC14A1Q13336 389 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 ELAVL3Q14576 367 aaKnown RBP7.61□□□□□ -1.19
NUP88-205ENST00000572809 NR1I3Q14994 352 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 IQCB1Q15051 598 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 C15orf59Q2T9L4 293 aaPredicted RBP7.61□□□□□ -1.19
NUP88-205ENST00000572809 KLHL40Q2TBA0 621 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 RAB6CQ53S08 254 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.61□□□□□ -1.19
NUP88-205ENST00000572809 STRADAQ7RTN6 431 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 TFAP2DQ7Z6R9 452 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 DSG4Q86SJ6 1040 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 GALNT12Q8IXK2 581 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 SH2D3CQ8N5H7 860 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 ATP11CQ8NB49 1132 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 C3orf20Q8ND61 904 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 OR2I1PQ8NGU4 316 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 EPS8L3Q8TE67 593 aaKnown RBP7.61□□□□□ -1.19
NUP88-205ENST00000572809 OR8D1Q8WZ84 308 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 SNX19Q92543 992 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 CENPIQ92674 756 aaPredicted RBP7.61□□□□□ -1.19
NUP88-205ENST00000572809 TRIM11Q96F44 468 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 FUCA2Q9BTY2 467 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 SPON2Q9BUD6 331 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 GSX2Q9BZM3 304 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 ZDHHC5Q9C0B5 715 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 ZYG11BQ9C0D3 744 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 RAB6CQ9H0N0 254 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 OSBPL2Q9H1P3 480 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 OSGEPQ9NPF4 335 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 PPARGC1AQ9UBK2 798 aaKnown RBP7.61□□□□□ -1.19
NUP88-205ENST00000572809 OR12D3Q9UGF7 316 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 SERGEFQ9UGK8 458 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 ADAMTS1Q9UHI8 967 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 FZD4Q9ULV1 537 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.61□□□□□ -1.19
NUP88-205ENST00000572809 PI4KAP42356 2102 aa7.61□□□□□ -1.19
NUP88-205ENST00000572809 MUC22E2RYF6 1773 aaPredicted RBP7.61□□□□□ -1.19
NUP88-205ENST00000572809 TBC1D3DA0A087WVF3 549 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 TBC1D3IA0A087WXS9 549 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 TBC1D3EA0A087X179 549 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 TBC1D3KA0A087X1G2 549 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 SYCE3A1L190 88 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 TBC1D3FA6NER0 549 aaPredicted RBP7.6□□□□□ -1.19
NUP88-205ENST00000572809 LRRC53A6NM62 1247 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 TBC1D3LB9A6J9 549 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 SNAP91O60641 907 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 MT-CO1P00395 513 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 SERPINC1P01008 464 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 TBC1D3HP0C7X1 549 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 SRCP12931 536 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 CD59P13987 128 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 GPD1P21695 349 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 CD27P26842 260 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 GRNP28799 593 aaKnown RBP7.6□□□□□ -1.19
NUP88-205ENST00000572809 PSMD8P48556 350 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 CSNK1EP49674 416 aaKnown RBP7.6□□□□□ -1.19
NUP88-205ENST00000572809 AFF3P51826 1226 aaKnown RBP7.6□□□□□ -1.19
NUP88-205ENST00000572809 HDAC4P56524 1084 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 TPM4P67936 248 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 NRG1Q02297 640 aaPredicted RBP7.6□□□□□ -1.19
NUP88-205ENST00000572809 TNP2Q05952 138 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 SLC20A2Q08357 652 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 GRIK2Q13002 908 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 NKAPLQ5M9Q1 402 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 ARTNQ5T4W7 220 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 SFMBT2Q5VUG0 894 aa7.6□□□□□ -1.19
NUP88-205ENST00000572809 FAM46CQ5VWP2 391 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms