RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 URB1O60287 2271 aaKnown RBP18.42■□□□□ 0.54
CHD3-214ENST00000572579 KDELR3O43731 214 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 RFPL3O75679 317 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 MYF5P13349 255 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 ITIH2P19823 946 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 HNRNPA2B1P22626 353 aaKnown RBP18.42■□□□□ 0.54
CHD3-214ENST00000572579 RECQLP46063 649 aaPredicted RBP18.42■□□□□ 0.54
CHD3-214ENST00000572579 ZNF143P52747 638 aaPredicted RBP18.42■□□□□ 0.54
CHD3-214ENST00000572579 C1QBPQ07021 282 aaKnown RBP18.42■□□□□ 0.54
CHD3-214ENST00000572579 ZNF542PQ5EBM4 170 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 ATXN7L2Q5T6C5 722 aaPredicted RBP18.42■□□□□ 0.54
CHD3-214ENST00000572579 Q6ZSR6 202 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 OXR1Q8N573 874 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 PCMTD1Q96MG8 357 aaPredicted RBP18.42■□□□□ 0.54
CHD3-214ENST00000572579 SELENOOQ9BVL4 669 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 C1QTNF2Q9BXJ5 285 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 MAGEH1Q9H213 219 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 RETREG1Q9H6L5 497 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 ZDHHC6Q9H6R6 413 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 DYRK4Q9NR20 520 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 TMEM63CQ9P1W3 806 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 KLF15Q9UIH9 416 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 LHX6Q9UPM6 363 aa18.42■□□□□ 0.54
CHD3-214ENST00000572579 LY6G6EA0A0G2JKS1 128 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 CXorf51AA0A1B0GTR3 108 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 IGLON5A6NGN9 336 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 C16orf96A6NNT2 1141 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 CALB1P05937 261 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 TPM2P07951 284 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 C1SP09871 688 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 CKMT2P17540 419 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 AKT2P31751 481 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 TYRO3Q06418 890 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 TARDBPQ13148 414 aaKnown RBP eCLIP18.41■□□□□ 0.54
CHD3-214ENST00000572579 FZD2Q14332 565 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 POLD3Q15054 466 aaPredicted RBP18.41■□□□□ 0.54
CHD3-214ENST00000572579 MYLK3Q32MK0 819 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 E4F1Q66K89 784 aaPredicted RBP18.41■□□□□ 0.54
CHD3-214ENST00000572579 ACAD10Q6JQN1 1059 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 SLFN11Q7Z7L1 901 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 MCOLN2Q8IZK6 566 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 AOPEPQ8N6M6 819 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 MCEEQ96PE7 176 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 FZD10Q9ULW2 581 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 HS3ST3A1Q9Y663 406 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 U3KQA8 63 aa18.41■□□□□ 0.54
CHD3-214ENST00000572579 COL5A1P20908 1838 aaPredicted RBP18.41■□□□□ 0.54
CHD3-214ENST00000572579 INSIG1O15503 277 aa18.4■□□□□ 0.54
CHD3-214ENST00000572579 AP1G1O43747 822 aa18.4■□□□□ 0.54
CHD3-214ENST00000572579 MAGEC1O60732 1142 aa18.4■□□□□ 0.54
CHD3-214ENST00000572579 RAMP2O60895 175 aa18.4■□□□□ 0.54
CHD3-214ENST00000572579 PIAS2O75928 621 aa18.4■□□□□ 0.54
CHD3-214ENST00000572579 CDK11BP21127 795 aaKnown RBP18.4■□□□□ 0.54
CHD3-214ENST00000572579 RPS21P63220 83 aaKnown RBP18.4■□□□□ 0.54
CHD3-214ENST00000572579 CCDC15Q0P6D6 951 aa18.4■□□□□ 0.54
CHD3-214ENST00000572579 MAPK8IP2Q13387 824 aaPredicted RBP18.4■□□□□ 0.54
CHD3-214ENST00000572579 ZNF211Q13398 564 aaPredicted RBP18.4■□□□□ 0.54
CHD3-214ENST00000572579 ZNF805Q5CZA5 627 aa18.4■□□□□ 0.54
CHD3-214ENST00000572579 LRRC73Q5JTD7 316 aa18.4■□□□□ 0.54
CHD3-214ENST00000572579 PDCD7Q8N8D1 485 aaKnown RBP18.4■□□□□ 0.54
CHD3-214ENST00000572579 RTL3Q8N8U3 475 aaKnown RBP18.4■□□□□ 0.54
CHD3-214ENST00000572579 OR2AP1Q8NGE2 309 aa18.4■□□□□ 0.54
CHD3-214ENST00000572579 HNRNPLLQ8WVV9 542 aaKnown RBP18.4■□□□□ 0.54
CHD3-214ENST00000572579 HMCESQ96FZ2 354 aa18.4■□□□□ 0.54
CHD3-214ENST00000572579 PPP1R16AQ96I34 528 aa18.4■□□□□ 0.54
CHD3-214ENST00000572579 FEM1CQ96JP0 617 aa18.4■□□□□ 0.54
CHD3-214ENST00000572579 GBP4Q96PP9 640 aa18.4■□□□□ 0.54
CHD3-214ENST00000572579 CALN1Q9BXU9 219 aa18.4■□□□□ 0.54
CHD3-214ENST00000572579 SEPT11Q9NVA2 429 aaKnown RBP18.4■□□□□ 0.54
CHD3-214ENST00000572579 PNMA8BQ9ULN7 279 aaPredicted RBP18.4■□□□□ 0.54
CHD3-214ENST00000572579 WASH4PA8MWX3 477 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 AREL1O15033 823 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 GSRP00390 522 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 UGT2B4P06133 528 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 JUPP14923 745 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 ACP1P24666 158 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 EPHB2P29323 1055 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 INSM1Q01101 510 aaPredicted RBP18.39■□□□□ 0.53
CHD3-214ENST00000572579 MAMLD1Q13495 774 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 CYTH1Q15438 398 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 CA9Q16790 459 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 COL28A1Q2UY09 1125 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 CCDC183Q5T5S1 534 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 HES3Q5TGS1 186 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 DNAJC24Q6P3W2 148 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 SCYL2Q6P3W7 929 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 RYBPQ8N488 228 aaPredicted RBP18.39■□□□□ 0.53
CHD3-214ENST00000572579 KLHL32Q96NJ5 620 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 CNPY3Q9BT09 278 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 TRIM7Q9C029 511 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 RTN4Q9NQC3 1192 aaKnown RBP18.39■□□□□ 0.53
CHD3-214ENST00000572579 GPATCH2LQ9NWQ4 482 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 ASXL3Q9C0F0 2248 aa18.39■□□□□ 0.53
CHD3-214ENST00000572579 KRIT1O00522 736 aa18.38■□□□□ 0.53
CHD3-214ENST00000572579 FFAR2O15552 330 aa18.38■□□□□ 0.53
CHD3-214ENST00000572579 BUB1O43683 1085 aa18.38■□□□□ 0.53
CHD3-214ENST00000572579 TMCC1O94876 653 aa18.38■□□□□ 0.53
CHD3-214ENST00000572579 POP4O95707 220 aaKnown RBP18.38■□□□□ 0.53
CHD3-214ENST00000572579 TIMP2P16035 220 aa18.38■□□□□ 0.53
CHD3-214ENST00000572579 ETFBP38117 255 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms