RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 LINGO4Q6UY18 593 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 PACS1Q6VY07 963 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 RBM23Q86U06 439 aaKnown RBP12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 RNF135Q8IUD6 432 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 RIN3Q8TB24 985 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 TMA16Q96EY4 203 aaKnown RBP12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 ZNF599Q96NL3 588 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 CCT8L2Q96SF2 557 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 PAIP2Q9BPZ3 127 aaKnown RBP12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 KIFC1Q9BW19 673 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 VPS45Q9NRW7 570 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 PLK2Q9NYY3 685 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 FAM169AQ9Y6X4 670 aa12.19□□□□□ -0.46
TOM1L1-213ENST00000572405 TYW5A2RUC4 315 aaKnown RBP12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 AP3B1O00203 1094 aa12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 MOSPD3O75425 235 aa12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 KRT38O76015 456 aa12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 LUC7L3O95232 432 aaKnown RBP12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 GBP2P32456 591 aaPredicted RBP12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 MAGEA10P43363 369 aaPredicted RBP12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 CDH18Q13634 790 aa12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 SLC1A5Q15758 541 aa12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 MICALCLQ6ZW33 695 aa12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 FAM217AQ8IXS0 508 aa12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 BANPQ8N9N5 519 aa12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 TDRD5Q8NAT2 981 aaKnown RBP12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 DENND1AQ8TEH3 1009 aa12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 TADA1Q96BN2 335 aa12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 AGAP2Q99490 1192 aa12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 CINPQ9BW66 212 aaPredicted RBP12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 ACE2Q9BYF1 805 aaPredicted RBP12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 YBX2Q9Y2T7 364 aaKnown RBP12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 HELZP42694 1942 aaKnown RBP12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 NOTCH4Q99466 2003 aa12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 PRRC2BQ5JSZ5 2229 aaKnown RBP12.18□□□□□ -0.46
TOM1L1-213ENST00000572405 RB1P06400 928 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 PBX2P40425 430 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 EPHA5P54756 1037 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 ARF5P84085 180 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 QPCTQ16769 361 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 HSP90AA5PQ58FG0 334 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 PCID2Q5JVF3 399 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 PKN3Q6P5Z2 889 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 TPGS1Q6ZTW0 290 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 SH2D5Q6ZV89 423 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 HTR3DQ70Z44 454 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 ADGRD2Q7Z7M1 963 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 KCNMB4Q86W47 210 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 PPHLN1Q8NEY8 458 aaKnown RBP12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 SH3RF2Q8TEC5 729 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 ZNF473Q8WTR7 871 aaKnown RBP12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 DDI1Q8WTU0 396 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 ATP2A3Q93084 1043 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 CHMP6Q96FZ7 201 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 ZNF317Q96PQ6 595 aaPredicted RBP12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 TGS1Q96RS0 853 aaKnown RBP12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 MGME1Q9BQP7 344 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 CCDC134Q9H6E4 229 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 C20orf96Q9NUD7 363 aaPredicted RBP12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 SLC17A7Q9P2U7 560 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 SLC2A6Q9UGQ3 507 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 SEPT3Q9UH03 358 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 GRID1Q9ULK0 1009 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 TCAF1Q9Y4C2 921 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 MAGEB16A2A368 324 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 SRRM3A6NNA2 597 aaPredicted RBP12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 RFPL1O75677 317 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 ASMTLO95671 621 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 FAM107AO95990 144 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 PTPN2P17706 415 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 AVPR1AP37288 418 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 CSKP41240 450 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 ABCG1P45844 678 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 CCT5P48643 541 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 SERPINB9P50453 376 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 GPM6BQ13491 265 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 MFN1Q8IWA4 741 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 CMTM8Q8IZV2 173 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 TCP10LQ8TDR4 215 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 ATXN7L3BQ96GX2 97 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 SGSM3Q96HU1 749 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 NSMCE3Q96MG7 304 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 PSKH2Q96QS6 385 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 SSU72Q9NP77 194 aaKnown RBP12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 VPS28Q9UK41 221 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 CLEC4EQ9ULY5 219 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 ARHGAP26Q9UNA1 814 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 HCFC2Q9Y5Z7 792 aa12.17□□□□□ -0.46
TOM1L1-213ENST00000572405 C5orf42Q9H799 3197 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 PRAMEF12O95522 483 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 CD160O95971 181 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 ATXN1LP0C7T5 689 aaKnown RBP12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 NAB1Q13506 487 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 SIRPB2Q5JXA9 342 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 LGSNQ5TDP6 509 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 ALG1LQ6GMV1 187 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 ESRP1Q6NXG1 681 aaKnown RBP12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 POTEHQ6S545 545 aa12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 GRASPQ7Z6J2 395 aaPredicted RBP12.16□□□□□ -0.46
TOM1L1-213ENST00000572405 LRRC34Q8IZ02 419 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms