RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 CHD5Q8TDI0 1954 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 SHROOM3Q8TF72 1996 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 TBC1D3DA0A087WVF3 549 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 TBC1D3IA0A087WXS9 549 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 TBC1D3EA0A087X179 549 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 TBC1D3KA0A087X1G2 549 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 TBC1D3FA6NER0 549 aaPredicted RBP7.92□□□□□ -1.14
SMG6-211ENST00000572369 SOWAHDA6NJG2 315 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 LRRC72A6NJI9 287 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 TBC1D3LB9A6J9 549 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 KPNA3O00505 521 aaPredicted RBP7.92□□□□□ -1.14
SMG6-211ENST00000572369 MCF2LO15068 1137 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 SPOPO43791 374 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 ZMPSTE24O75844 475 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 FSBPO95073 299 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 NDUFA10O95299 355 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 SEMA4FO95754 770 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 IGSF6O95976 241 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 PRNPP04156 253 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 TBC1D3HP0C7X1 549 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 GNSP15586 552 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 AMPD1P23109 780 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 ITPKAP23677 461 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 CHRNA3P32297 505 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 ACSL1P33121 698 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 SERPINB6P35237 376 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 HCAR3P49019 387 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 PAPOLAP51003 745 aaKnown RBP7.92□□□□□ -1.14
SMG6-211ENST00000572369 RHOAP61586 193 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 SNRPD1P62314 119 aaKnown RBP7.92□□□□□ -1.14
SMG6-211ENST00000572369 SLC25A11Q02978 314 aaKnown RBP7.92□□□□□ -1.14
SMG6-211ENST00000572369 RAD51Q06609 339 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 SERINC3Q13530 473 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 DPYSL2Q16555 572 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 DCAF12L1Q5VU92 463 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 TBC1D3GQ6DHY5 549 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 TXNRD3NBQ6F5E7 133 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 TBC1D3CQ6IPX1 549 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 CYP4V2Q6ZWL3 525 aaPredicted RBP7.92□□□□□ -1.14
SMG6-211ENST00000572369 USP30Q70CQ3 517 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 KIAA1328Q86T90 577 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 SYT12Q8IV01 421 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 SLC41A1Q8IVJ1 513 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 TBC1D3Q8IZP1 549 aaPredicted RBP7.92□□□□□ -1.14
SMG6-211ENST00000572369 LZTR1Q8N653 840 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 OR2A12Q8NGT7 310 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 OR14C36Q8NHC7 312 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 PIP4K2CQ8TBX8 421 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 FRS2Q8WU20 508 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 CASKIN2Q8WXE0 1202 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 HEPHQ9BQS7 1158 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 CEP44Q9C0F1 390 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 NEUROG2Q9H2A3 272 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 SGK2Q9HBY8 427 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 PCDH18Q9HCL0 1135 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 KLHL11Q9NVR0 708 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 UBA2Q9UBT2 640 aaPredicted RBP7.92□□□□□ -1.14
SMG6-211ENST00000572369 SUSD2Q9UGT4 822 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 FZD4Q9ULV1 537 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 NEU3Q9UQ49 428 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 PCDHA13Q9Y5I0 950 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 ACTL7AQ9Y615 435 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 EPN1Q9Y6I3 576 aaPredicted RBP7.92□□□□□ -1.14
SMG6-211ENST00000572369 C2CD3Q4AC94 2353 aa7.92□□□□□ -1.14
SMG6-211ENST00000572369 ADAMTS9Q9P2N4 1935 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 LRRD1A4D1F6 860 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 PLK4O00444 970 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 KRIT1O00522 736 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 KHNYNO15037 678 aaKnown RBP7.91□□□□□ -1.14
SMG6-211ENST00000572369 PALMO75781 387 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 NEBLO76041 1014 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 TMCC1O94876 653 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 IGLV3-19P01714 112 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 MAOBP27338 520 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 MAN1A1P33908 653 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 CCNHP51946 323 aaPredicted RBP7.91□□□□□ -1.14
SMG6-211ENST00000572369 ATXN3P54252 364 aaPredicted RBP7.91□□□□□ -1.14
SMG6-211ENST00000572369 GSDMDP57764 484 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 TAS2R40P59535 323 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 MMRN1Q13201 1228 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 PDK2Q15119 407 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 DUOXA1Q1HG43 343 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 ATP13A4Q4VNC1 1196 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 TRIM61Q5EBN2 209 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 ARSIQ5FYB1 569 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 ARTNQ5T4W7 220 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 DPY19L3Q6ZPD9 716 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 POLNQ7Z5Q5 900 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 RABEPKQ7Z6M1 372 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 TXLNBQ8N3L3 684 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 AADATQ8N5Z0 425 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 NETO2Q8NC67 525 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 CHST14Q8NCH0 376 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 LSM14AQ8ND56 463 aaKnown RBP7.91□□□□□ -1.14
SMG6-211ENST00000572369 TMIEQ8NEW7 156 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 CADM4Q8NFZ8 388 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 OR2AP1Q8NGE2 309 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 CEP76Q8TAP6 659 aa7.91□□□□□ -1.14
SMG6-211ENST00000572369 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.91□□□□□ -1.14
SMG6-211ENST00000572369 NSMCE1Q8WV22 266 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms