RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 UQCRFS1P1P0C7P4 283 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 ME1P48163 572 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 CDK7P50613 346 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 SLC37A1P57057 533 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 FOXL2P58012 376 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 TIMM10P62072 90 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 FKBP1BP68106 108 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 TFCP2Q12800 502 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 CHAF1AQ13111 956 aaPredicted RBP4.47□□□□□ -1.69
NUP88-202ENST00000570937 DEFB115Q30KQ5 88 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 AWAT2Q6E213 333 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 PGBD2Q6P3X8 592 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 TMEM88Q6PEY1 159 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 DHRS13Q6UX07 377 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 ZNF793Q6ZN11 406 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 ARL14EPQ8N8R7 260 aaPredicted RBP4.47□□□□□ -1.69
NUP88-202ENST00000570937 FAM47BQ8NA70 645 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 ZNF527Q8NB42 609 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 ADPRHL1Q8NDY3 354 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 TEKT1Q969V4 418 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 ZBTB9Q96C00 473 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 PIMREGQ9BSJ6 248 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 SCNM1Q9BWG6 230 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 FOXP1Q9H334 677 aaPredicted RBP4.47□□□□□ -1.69
NUP88-202ENST00000570937 GPR108Q9NPR9 543 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 ZBTB40Q9NUA8 1239 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 TMOD2Q9NZR1 351 aa4.47□□□□□ -1.69
NUP88-202ENST00000570937 AGO2Q9UKV8 859 aaKnown RBP4.47□□□□□ -1.69
NUP88-202ENST00000570937 PA2G4Q9UQ80 394 aaKnown RBP4.47□□□□□ -1.69
NUP88-202ENST00000570937 LTBP1Q14766 1721 aa4.46□□□□□ -1.69
NUP88-202ENST00000570937 TTC3P53804 2025 aa4.46□□□□□ -1.69
NUP88-202ENST00000570937 CYP3A7-CYP3A51PA0A087WV96 503 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 ZNF814B7Z6K7 855 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 KCNAB3O43448 404 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 CNTN5O94779 1100 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 LARGE1O95461 756 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 FGF2P09038 288 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 TGM2P21980 687 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 CYP3A7P24462 503 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 RPL15P61313 204 aaKnown RBP4.46□□□□□ -1.7
NUP88-202ENST00000570937 GSTO1P78417 241 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 TNFAIP2Q03169 654 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 LEXMQ3ZCV2 418 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 MIDNQ504T8 468 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 TTC39AQ5SRH9 613 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 LIPMQ5VYY2 423 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 DZIP1Q86YF9 867 aaKnown RBP4.46□□□□□ -1.7
NUP88-202ENST00000570937 ADGRF3Q8IZF5 1079 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 MMP21Q8N119 569 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 PAQR4Q8N4S7 273 aaPredicted RBP4.46□□□□□ -1.7
NUP88-202ENST00000570937 STYXQ8WUJ0 223 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 KIF1BPQ96EK5 621 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 REXO5Q96IC2 774 aaKnown RBP4.46□□□□□ -1.7
NUP88-202ENST00000570937 ZNF347Q96SE7 839 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 MXD3Q9BW11 206 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 KATNAL1Q9BW62 490 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 GLIS2Q9BZE0 524 aaPredicted RBP4.46□□□□□ -1.7
NUP88-202ENST00000570937 SFXN1Q9H9B4 322 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 MLXIPQ9HAP2 919 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 OBP2BQ9NPH6 170 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 SEMA4BQ9NPR2 832 aaPredicted RBP4.46□□□□□ -1.7
NUP88-202ENST00000570937 POT1Q9NUX5 634 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 GGA3Q9NZ52 723 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 IPO11Q9UI26 975 aaKnown RBP4.46□□□□□ -1.7
NUP88-202ENST00000570937 MAGED2Q9UNF1 606 aaPredicted RBP4.46□□□□□ -1.7
NUP88-202ENST00000570937 TNNQ9UQP3 1299 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 LRCH1Q9Y2L9 728 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 PDS5AQ29RF7 1337 aaKnown RBP4.46□□□□□ -1.7
NUP88-202ENST00000570937 SALL1Q9NSC2 1324 aa4.46□□□□□ -1.7
NUP88-202ENST00000570937 COL4A1P02462 1669 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 A0A0G2JK05 382 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 KIR2DS5A0A0G2JLQ3 304 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 FAM90A18PA6NE21 464 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 FAM90A16PA6NEW6 464 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 FAM90A9PA6NNJ1 464 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 LGALS16A8MUM7 142 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 FAM90A5PA8MXJ8 464 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 KIR2DS3K7RE56 304 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 SYT5O00445 386 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 TULP3O75386 442 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 SKAP2O75563 359 aaPredicted RBP4.45□□□□□ -1.7
NUP88-202ENST00000570937 ALDOAP04075 364 aaKnown RBP4.45□□□□□ -1.7
NUP88-202ENST00000570937 LDHCP07864 332 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 FAM90A15PP0C7V4 464 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 FAM90A14PP0C7W9 464 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 PDIA3P30101 505 aaKnown RBP4.45□□□□□ -1.7
NUP88-202ENST00000570937 MAP2K2P36507 400 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 RRP1P56182 461 aaKnown RBP4.45□□□□□ -1.7
NUP88-202ENST00000570937 HUNKP57058 714 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 TAS2R50P59544 299 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 MAP2K1Q02750 393 aaPredicted RBP4.45□□□□□ -1.7
NUP88-202ENST00000570937 PGM5Q15124 567 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 PFKFB4Q16877 469 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 ZACNQ401N2 412 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 CST9Q5W186 159 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 ANKRD40Q6AI12 368 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 TMED8Q6PL24 325 aaPredicted RBP4.45□□□□□ -1.7
NUP88-202ENST00000570937 ARMC9Q7Z3E5 817 aa4.45□□□□□ -1.7
NUP88-202ENST00000570937 TECPR1Q7Z6L1 1165 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms