RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 CBX8Q9HC52 389 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 UCKL1Q9NWZ5 548 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 NLGN3Q9NZ94 848 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 HECAQ9UBI9 543 aaPredicted RBP13.36□□□□□ -0.27
SPG7-221ENST00000569720 IPO11Q9UI26 975 aaKnown RBP13.36□□□□□ -0.27
SPG7-221ENST00000569720 DAAM1Q9Y4D1 1078 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 FADS3Q9Y5Q0 445 aa13.36□□□□□ -0.27
SPG7-221ENST00000569720 RNF103O00237 685 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 NEMP1O14524 444 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 FPGTO14772 594 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 SCAMP1O15126 338 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 TSPAN6O43657 245 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 PAK4O96013 591 aaPredicted RBP13.35□□□□□ -0.27
SPG7-221ENST00000569720 MT-CO3P00414 261 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 CYP1A1P04798 512 aaPredicted RBP13.35□□□□□ -0.27
SPG7-221ENST00000569720 CKMT1AP12532 417 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 CDK11BP21127 795 aaKnown RBP13.35□□□□□ -0.27
SPG7-221ENST00000569720 MMP8P22894 467 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 ACTN2P35609 894 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 SOX5P35711 763 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 ACVRL1P37023 503 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 PTPN9P43378 593 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 RABIFP47224 123 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 POLR2FP61218 127 aaKnown RBP13.35□□□□□ -0.27
SPG7-221ENST00000569720 SNRPD1P62314 119 aaKnown RBP13.35□□□□□ -0.27
SPG7-221ENST00000569720 NCAPHQ15003 741 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 C15orf59Q2T9L4 293 aaPredicted RBP13.35□□□□□ -0.27
SPG7-221ENST00000569720 CDKAL1Q5VV42 579 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 KDM7AQ6ZMT4 941 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 PARS2Q7L3T8 475 aaKnown RBP13.35□□□□□ -0.27
SPG7-221ENST00000569720 STRADAQ7RTN6 431 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 SLC22A18ASQ8N1D0 253 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 SLC20A1Q8WUM9 679 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 FGF11Q92914 225 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 ARHGEF2Q92974 986 aaKnown RBP13.35□□□□□ -0.27
SPG7-221ENST00000569720 TBC1D31Q96DN5 1066 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 ARHGEF26Q96DR7 871 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 C11orf70Q9BRQ4 267 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 TM6SF2Q9BZW4 377 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 MAGEH1Q9H213 219 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 GANQ9H2C0 597 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 TMEM248Q9NWD8 314 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 DNAI1Q9UI46 699 aa13.35□□□□□ -0.27
SPG7-221ENST00000569720 NOCTQ9UK39 431 aaKnown RBP13.35□□□□□ -0.27
SPG7-221ENST00000569720 SMG1Q96Q15 3661 aaKnown RBP13.35□□□□□ -0.27
SPG7-221ENST00000569720 ASXL3Q9C0F0 2248 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 ZSCAN5CA6NGD5 496 aaPredicted RBP13.34□□□□□ -0.27
SPG7-221ENST00000569720 C2CD4BA6NLJ0 364 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 C16orf96A6NNT2 1141 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 TLX3O43711 291 aaPredicted RBP13.34□□□□□ -0.27
SPG7-221ENST00000569720 BRINP1O60477 761 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 RAMP2O60895 175 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 POP4O95707 220 aaKnown RBP13.34□□□□□ -0.27
SPG7-221ENST00000569720 GSRP00390 522 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 TPM3P06753 285 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 GP1BAP07359 652 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 KRT3P12035 628 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 STAT1P42224 750 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 NSFP46459 744 aaKnown RBP13.34□□□□□ -0.27
SPG7-221ENST00000569720 FMO1Q01740 532 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 RAD51Q06609 339 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 SYCP1Q15431 976 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 CCDC14Q49A88 953 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 ZNF805Q5CZA5 627 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 ZNF542PQ5EBM4 170 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 ARTNQ5T4W7 220 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 MANEALQ5VSG8 457 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 PHLDB2Q86SQ0 1253 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 PARGQ86W56 976 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 ZNF354CQ86Y25 554 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 AOPEPQ8N6M6 819 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 OR2AP1Q8NGE2 309 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 SLC30A5Q8TAD4 765 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 SNIP1Q8TAD8 396 aaKnown RBP13.34□□□□□ -0.27
SPG7-221ENST00000569720 BMFQ96LC9 184 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 APOLD1Q96LR9 279 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 LENG8Q96PV6 779 aaPredicted RBP13.34□□□□□ -0.27
SPG7-221ENST00000569720 DEPDC7Q96QD5 511 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 OSBPL1AQ9BXW6 950 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 ABCG4Q9H172 646 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 NLRC4Q9NPP4 1024 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 FAM207AQ9NSI2 230 aaPredicted RBP13.34□□□□□ -0.27
SPG7-221ENST00000569720 NCKIPSDQ9NZQ3 722 aa13.34□□□□□ -0.27
SPG7-221ENST00000569720 SPTY2D1-AS1A0A0U1RR47 76 aa13.33□□□□□ -0.28
SPG7-221ENST00000569720 ANKRD62A6NC57 917 aa13.33□□□□□ -0.28
SPG7-221ENST00000569720 POM121BA6NF01 834 aa13.33□□□□□ -0.28
SPG7-221ENST00000569720 IGLON5A6NGN9 336 aa13.33□□□□□ -0.28
SPG7-221ENST00000569720 KRIT1O00522 736 aa13.33□□□□□ -0.28
SPG7-221ENST00000569720 RIOK3O14730 519 aaKnown RBP13.33□□□□□ -0.28
SPG7-221ENST00000569720 OPA1O60313 960 aa13.33□□□□□ -0.28
SPG7-221ENST00000569720 LRIG2O94898 1065 aa13.33□□□□□ -0.28
SPG7-221ENST00000569720 CD160O95971 181 aa13.33□□□□□ -0.28
SPG7-221ENST00000569720 CSF2P04141 144 aa13.33□□□□□ -0.28
SPG7-221ENST00000569720 CALB1P05937 261 aa13.33□□□□□ -0.28
SPG7-221ENST00000569720 PLEKP08567 350 aaPredicted RBP13.33□□□□□ -0.28
SPG7-221ENST00000569720 NME1P15531 152 aaKnown RBP13.33□□□□□ -0.28
SPG7-221ENST00000569720 CHRNB2P17787 502 aa13.33□□□□□ -0.28
SPG7-221ENST00000569720 ITPKBP27987 946 aa13.33□□□□□ -0.28
SPG7-221ENST00000569720 JAM2P57087 298 aa13.33□□□□□ -0.28
SPG7-221ENST00000569720 PDE1CQ14123 709 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms