RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 CREB3O43889 395 aa16.9■□□□□ 0.3
CDR2-207ENST00000569045 ALPPL2P10696 532 aa16.9■□□□□ 0.3
CDR2-207ENST00000569045 CKMT2P17540 419 aa16.9■□□□□ 0.3
CDR2-207ENST00000569045 DNAJC3Q13217 504 aa16.9■□□□□ 0.3
CDR2-207ENST00000569045 NCAPHQ15003 741 aa16.9■□□□□ 0.3
CDR2-207ENST00000569045 TMEM259Q4ZIN3 620 aa16.9■□□□□ 0.3
CDR2-207ENST00000569045 ZNF805Q5CZA5 627 aa16.9■□□□□ 0.3
CDR2-207ENST00000569045 SEL1L3Q68CR1 1132 aa16.9■□□□□ 0.3
CDR2-207ENST00000569045 PTAR1Q7Z6K3 402 aaPredicted RBP16.9■□□□□ 0.3
CDR2-207ENST00000569045 RTL3Q8N8U3 475 aaKnown RBP16.9■□□□□ 0.3
CDR2-207ENST00000569045 IFT43Q96FT9 208 aa16.9■□□□□ 0.3
CDR2-207ENST00000569045 VCPIP1Q96JH7 1222 aa16.9■□□□□ 0.3
CDR2-207ENST00000569045 GDAP1L1Q96MZ0 367 aa16.9■□□□□ 0.3
CDR2-207ENST00000569045 FZD3Q9NPG1 666 aa16.9■□□□□ 0.3
CDR2-207ENST00000569045 NDFIP2Q9NV92 336 aa16.9■□□□□ 0.3
CDR2-207ENST00000569045 EVA1BQ9NVM1 165 aa16.9■□□□□ 0.3
CDR2-207ENST00000569045 IPO11Q9UI26 975 aaKnown RBP16.9■□□□□ 0.3
CDR2-207ENST00000569045 FADS3Q9Y5Q0 445 aa16.9■□□□□ 0.3
CDR2-207ENST00000569045 FAM149AA5PLN7 773 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 TRABD2BA6NFA1 517 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 NEMP2A6NFY4 417 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 C16orf96A6NNT2 1141 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 FGF10O15520 208 aaPredicted RBP16.89■□□□□ 0.29
CDR2-207ENST00000569045 SDC3O75056 442 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 IGSF6O95976 241 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 HTR7P34969 479 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 ACADVLP49748 655 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 YBEYP58557 167 aaPredicted RBP16.89■□□□□ 0.29
CDR2-207ENST00000569045 ZNF211Q13398 564 aaPredicted RBP16.89■□□□□ 0.29
CDR2-207ENST00000569045 MYLK3Q32MK0 819 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 PARP15Q460N3 678 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 ANO6Q4KMQ2 910 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 Q6ZSR6 202 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 PARS2Q7L3T8 475 aaKnown RBP16.89■□□□□ 0.29
CDR2-207ENST00000569045 MCOLN2Q8IZK6 566 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 OR13H1Q8NG92 308 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 OR6K2Q8NGY2 324 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 MDM1Q8TC05 714 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 BPIFA3Q9BQP9 254 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 PARVAQ9NVD7 372 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 DKK4Q9UBT3 224 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 ZFR2Q9UPR6 939 aaKnown RBP16.89■□□□□ 0.29
CDR2-207ENST00000569045 PLXNB3Q9ULL4 1909 aa16.89■□□□□ 0.29
CDR2-207ENST00000569045 ACACAQ13085 2346 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 TRPM6Q9BX84 2022 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 FPGTO14772 594 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 PAK4O96013 591 aaPredicted RBP16.88■□□□□ 0.29
CDR2-207ENST00000569045 CAPNS1P04632 268 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 UGT2B4P06133 528 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 ATP1A3P13637 1013 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 RABIFP47224 123 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 CLDN2P57739 230 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 HNRNPKP61978 463 aaKnown RBP eCLIP16.88■□□□□ 0.295e-9■□□□□ 9.6
CDR2-207ENST00000569045 RPL7AP62424 266 aaKnown RBP16.88■□□□□ 0.29
CDR2-207ENST00000569045 DAB2P98082 770 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 ASIC2Q16515 512 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 INO80DQ53TQ3 878 aaPredicted RBP16.88■□□□□ 0.29
CDR2-207ENST00000569045 LEKR1Q6ZMV7 388 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 APTXQ7Z2E3 356 aaKnown RBP16.88■□□□□ 0.29
CDR2-207ENST00000569045 ABI3BPQ7Z7G0 1075 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 TSC1Q92574 1164 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 C1QTNF7Q9BXJ2 289 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 FZD10Q9ULW2 581 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 LHX6Q9UPM6 363 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 ACTL7AQ9Y615 435 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 DOCK9Q9BZ29 2069 aa16.88■□□□□ 0.29
CDR2-207ENST00000569045 EIF3CLB5ME19 914 aaKnown RBP16.87■□□□□ 0.29
CDR2-207ENST00000569045 H3BM21 787 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 RNF103O00237 685 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 TAF4O00268 1085 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 TMCC1O94876 653 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 CD160O95971 181 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 XPAP23025 273 aaPredicted RBP16.87■□□□□ 0.29
CDR2-207ENST00000569045 DGKAP23743 735 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 TPI1P60174 286 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 RHOAP61586 193 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 E2F1Q01094 437 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 CYP4F3Q08477 520 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 GDPD4Q6W3E5 623 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 KYAT3Q6YP21 454 aaKnown RBP16.87■□□□□ 0.29
CDR2-207ENST00000569045 GCNT7Q6ZNI0 430 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 KANSL1Q7Z3B3 1105 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 TMC6Q7Z403 805 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 IRF2BP2Q7Z5L9 587 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 TTC7BQ86TV6 843 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 PYROXD2Q8N2H3 581 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 NXPE2Q96DL1 559 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 KLHL32Q96NJ5 620 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 LENG8Q96PV6 779 aaPredicted RBP16.87■□□□□ 0.29
CDR2-207ENST00000569045 EIF3CQ99613 913 aaKnown RBP16.87■□□□□ 0.29
CDR2-207ENST00000569045 NCAPGQ9BPX3 1015 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 MAGEB5Q9BZ81 275 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 TTYH3Q9C0H2 523 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 HSD3B7Q9H2F3 369 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 RTN4Q9NQC3 1192 aaKnown RBP16.87■□□□□ 0.29
CDR2-207ENST00000569045 DNAJC28Q9NX36 388 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 NEU3Q9UQ49 428 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 ZFYVE26Q68DK2 2539 aa16.87■□□□□ 0.29
CDR2-207ENST00000569045 KNTC1P50748 2209 aa16.86■□□□□ 0.29
CDR2-207ENST00000569045 TCRBV5S1A1TA0A578 114 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms