RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 GUSBP11Q6P575 273 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 BNIPLQ7Z465 357 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 PARGQ86W56 976 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 RBFAQ8N0V3 343 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 ZNF248Q8NDW4 579 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 FEM1CQ96JP0 617 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 KLF6Q99612 283 aaPredicted RBP15.8■□□□□ 0.12
NME3-211ENST00000568561 MAGEB5Q9BZ81 275 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 CEP44Q9C0F1 390 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 ABCG4Q9H172 646 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 TCEAL2Q9H3H9 227 aaPredicted RBP15.8■□□□□ 0.12
NME3-211ENST00000568561 CPNE5Q9HCH3 593 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 HECAQ9UBI9 543 aaPredicted RBP15.8■□□□□ 0.12
NME3-211ENST00000568561 IPO11Q9UI26 975 aaKnown RBP15.8■□□□□ 0.12
NME3-211ENST00000568561 TMEM59LQ9UK28 342 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 HS3ST3A1Q9Y663 406 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 LRRK1Q38SD2 2015 aa15.8■□□□□ 0.12
NME3-211ENST00000568561 PIEZO2Q9H5I5 2752 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 TEX51A0A1B0GUA7 166 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 A0A1W2PNU3 283 aaPredicted RBP15.79■□□□□ 0.12
NME3-211ENST00000568561 PMS2P1A4D2B8 440 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 NEMP2A6NFY4 417 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 PES1O00541 588 aaKnown RBP15.79■□□□□ 0.12
NME3-211ENST00000568561 GJB6O95452 261 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 CSF2P04141 144 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 MMEP08473 750 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 TGM2P21980 687 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 NOMO3P69849 1222 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 C15orf59Q2T9L4 293 aaPredicted RBP15.79■□□□□ 0.12
NME3-211ENST00000568561 DPCR1Q3MIW9 517 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 C3orf38Q5JPI3 329 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 KLHDC7AQ5VTJ3 777 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 ZNF783Q6ZMS7 281 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 EFL1Q7Z2Z2 1120 aaKnown RBP15.79■□□□□ 0.12
NME3-211ENST00000568561 FAM181AQ8N9Y4 354 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 LMX1AQ8TE12 382 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 SLC20A1Q8WUM9 679 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 IFT43Q96FT9 208 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 HIC2Q96JB3 615 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 ZNF578Q96N58 590 aaPredicted RBP15.79■□□□□ 0.12
NME3-211ENST00000568561 HAPLN3Q96S86 360 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 TUBGCP2Q9BSJ2 902 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.79■□□□□ 0.12
NME3-211ENST00000568561 DNAI1Q9UI46 699 aa15.79■□□□□ 0.12
NME3-211ENST00000568561 C16orf96A6NNT2 1141 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 FAM72CH0Y354 149 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 H3BM21 787 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 TK2O00142 265 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 KRIT1O00522 736 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 NEMP1O14524 444 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 FPGTO14772 594 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 AQP9O43315 295 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 UGT2B4P06133 528 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 GP1BAP07359 652 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 JUNDP17535 347 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 RABIFP47224 123 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 DUSP3P51452 185 aaPredicted RBP15.78■□□□□ 0.12
NME3-211ENST00000568561 EIF2B5Q13144 721 aaKnown RBP15.78■□□□□ 0.12
NME3-211ENST00000568561 SGCGQ13326 291 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 ATXN7L2Q5T6C5 722 aaPredicted RBP15.78■□□□□ 0.12
NME3-211ENST00000568561 ARHGAP40Q5TG30 622 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 FAM72AQ5TYM5 149 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 FAM72DQ6L9T8 149 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 RWDD4Q6NW29 188 aaKnown RBP15.78■□□□□ 0.12
NME3-211ENST00000568561 ZCCHC8Q6NZY4 707 aaKnown RBP15.78■□□□□ 0.12
NME3-211ENST00000568561 FAM72BQ86X60 149 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 DCP2Q8IU60 420 aaKnown RBP15.78■□□□□ 0.12
NME3-211ENST00000568561 ZNF843Q8N446 348 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 MLKLQ8NB16 471 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 NETO2Q8NC67 525 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 EPS8L1Q8TE68 723 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 VOPP1Q96AW1 172 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 ATXN7L3BQ96GX2 97 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 DUSP23Q9BVJ7 150 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 C1QTNF2Q9BXJ5 285 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 NAA15Q9BXJ9 866 aaKnown RBP15.78■□□□□ 0.12
NME3-211ENST00000568561 POLR1BQ9H9Y6 1135 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 ASCL3Q9NQ33 180 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 PNMA8BQ9ULN7 279 aaPredicted RBP15.78■□□□□ 0.12
NME3-211ENST00000568561 SATB2Q9UPW6 733 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 COL6A6A6NMZ7 2263 aa15.78■□□□□ 0.12
NME3-211ENST00000568561 LRP4O75096 1905 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 F8VZ95 297 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 AP1G1O43747 822 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 LSM8O95777 96 aaKnown RBP15.77■□□□□ 0.12
NME3-211ENST00000568561 LSSP48449 732 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 SLC20A2Q08357 652 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 C1orf61Q13536 156 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 ISXQ2M1V0 245 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 PERM1Q5SV97 790 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 MANEALQ5VSG8 457 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 VPS36Q86VN1 386 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 FAM114A1Q8IWE2 563 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 JOSD2Q8TAC2 188 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 FAM174AQ8TBP5 190 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 KCNE4Q8WWG9 221 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 VCPIP1Q96JH7 1222 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 PPARGC1AQ9UBK2 798 aaKnown RBP15.77■□□□□ 0.12
NME3-211ENST00000568561 OR12D3Q9UGF7 316 aa15.77■□□□□ 0.12
NME3-211ENST00000568561 NEU3Q9UQ49 428 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms