RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 AHCYL2Q96HN2 611 aaKnown RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 MPHOSPH6Q99547 160 aaKnown RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 AP1M1Q9BXS5 423 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 KRTAP4-5Q9BYR2 181 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 TXLNGYQ9BZA5 131 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 SPATC1LQ9H0A9 340 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 TMEM117Q9H0C3 514 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 NSRP1Q9H0G5 558 aaKnown RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 THAP2Q9H0W7 228 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 HIPK3Q9H422 1215 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 LRRC19Q9H756 370 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 PPCSQ9HAB8 311 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 ATP6V0A4Q9HBG4 840 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 MRPL47Q9HD33 250 aaKnown RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 PXMP2Q9NR77 195 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 C1orf112Q9NSG2 853 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 RAB20Q9NX57 234 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 SMARCAL1Q9NZC9 954 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 EHD2Q9NZN4 543 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 WRAP73Q9P2S5 460 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 DPP7Q9UHL4 492 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 MCM8Q9UJA3 840 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 NOCTQ9UK39 431 aaKnown RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 EDARQ9UNE0 448 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 PACSIN2Q9UNF0 486 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 PCDHB2Q9Y5E7 798 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 PCDHA3Q9Y5H8 950 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 PKD1L2Q7Z442 2459 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 LOXHD1Q8IVV2 1947 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 ZFHX2Q9C0A1 2572 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-217ENST00000567817 DENND3A2RUS2 1198 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 GMNCA6NCL1 334 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 K7ESF4 209 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 DDX39AO00148 427 aaKnown RBP5.51□□□□□ -1.53
CAPN3-217ENST00000567817 HNRNPDLO14979 420 aaKnown RBP5.51□□□□□ -1.53
CAPN3-217ENST00000567817 TTI1O43156 1089 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 PSTPIP1O43586 416 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 AKAP8O43823 692 aaKnown RBP5.51□□□□□ -1.53
CAPN3-217ENST00000567817 DUSP11O75319 330 aaKnown RBP5.51□□□□□ -1.53
CAPN3-217ENST00000567817 PRKD3O94806 890 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 BAIAP3O94812 1187 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 PEX11BO96011 259 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 PGK1P00558 417 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 FSHBP01225 129 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 CD4P01730 458 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 PIGRP01833 764 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 CA3P07451 260 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 CTSSP25774 331 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 ICAM3P32942 547 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 RDXP35241 583 aaKnown RBP5.51□□□□□ -1.53
CAPN3-217ENST00000567817 NPTX2P47972 431 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 GCLMP48507 274 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 CCT5P48643 541 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 PMS2P54278 862 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 TAP1Q03518 808 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 CYP24A1Q07973 514 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 PPP3CAQ08209 521 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 TUBA3CQ13748 450 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 COG2Q14746 738 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 PTGISQ16647 500 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 FAM214AQ32MH5 1076 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 KRT71Q3SY84 523 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 FAM153CQ494X1 144 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 XKR3Q5GH77 459 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 LIN9Q5TKA1 542 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 GKAP1Q5VSY0 366 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-217ENST00000567817 NAA35Q5VZE5 725 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 CCSAPQ6IQ19 270 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-217ENST00000567817 GJB7Q6PEY0 223 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 TUBA3EQ6PEY2 450 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 ABHD15Q6UXT9 468 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 NLRP14Q86W24 1093 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 SLC13A5Q86YT5 568 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-217ENST00000567817 CCDC50Q8IVM0 306 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 ADHFE1Q8IWW8 467 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 CMIPQ8IY22 773 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 CNPY4Q8N129 248 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 OTUD6BQ8N6M0 293 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 GLB1L3Q8NCI6 653 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-217ENST00000567817 ATL2Q8NHH9 583 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 OLIG1Q8TAK6 271 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 ZNF480Q8WV37 535 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 CD101Q93033 1021 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 MAGOHBQ96A72 148 aaKnown RBP5.51□□□□□ -1.53
CAPN3-217ENST00000567817 ZNF653Q96CK0 615 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 FAXDC2Q96IV6 333 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 CEP170P1Q96L14 293 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 FNBP1Q96RU3 617 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 MNTQ99583 582 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 CBWD1Q9BRT8 395 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 TEX13BQ9BXU2 312 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 VTA1Q9NP79 307 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 RNF146Q9NTX7 359 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 C14orf119Q9NWQ9 140 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 FBXO40Q9UH90 709 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 FAM153AQ9UHL3 310 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 SLC12A6Q9UHW9 1150 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 AJAP1Q9UKB5 411 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-217ENST00000567817 NFS1Q9Y697 457 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 STYXL1Q9Y6J8 313 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms