RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 FSTL5Q8N475 847 aaPredicted RBP9.43□□□□□ -0.9
BBS4-210ENST00000566400 NETO2Q8NC67 525 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 FBXO27Q8NI29 283 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 SLC26A7Q8TE54 656 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 FCRL2Q96LA5 508 aaPredicted RBP9.43□□□□□ -0.9
BBS4-210ENST00000566400 TRMOQ9BU70 441 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 FICDQ9BVA6 458 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 KLHL4Q9C0H6 718 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 SIK2Q9H0K1 926 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 RETREG1Q9H6L5 497 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 CAB39LQ9H9S4 337 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 EFCAB1Q9HAE3 211 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 TREX1Q9NSU2 369 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 OLA1Q9NTK5 396 aaKnown RBP9.43□□□□□ -0.9
BBS4-210ENST00000566400 ZNF358Q9NW07 568 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 RBM22Q9NW64 420 aaKnown RBP eCLIP9.43□□□□□ -0.9
BBS4-210ENST00000566400 PCDH10Q9P2E7 1040 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 POMPQ9Y244 141 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 E9PAM4 449 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 E9PBE3 544 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 KLHL41O60662 606 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 VAPBO95292 243 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 PIGNO95427 931 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 PIK3R1P27986 724 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 ARCN1P48444 511 aaKnown RBP9.43□□□□□ -0.9
BBS4-210ENST00000566400 TUBP50607 506 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 EPHB1P54762 984 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 IRF9Q00978 393 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 TNK2Q07912 1038 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 USP4Q13107 963 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 BTG3Q14201 252 aaPredicted RBP9.43□□□□□ -0.9
BBS4-210ENST00000566400 DSC3Q14574 896 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 SLC9B1Q4ZJI4 515 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 GDF6Q6KF10 455 aaPredicted RBP9.43□□□□□ -0.9
BBS4-210ENST00000566400 IZUMO2Q6UXV1 221 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 RANBP10Q6VN20 620 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 NAPRTQ6XQN6 538 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 FRMD7Q6ZUT3 714 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 OTOP3Q7RTS5 596 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 PGAM4Q8N0Y7 254 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 UMODL1-AS1Q8N2C9 162 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 POU5F2Q8N7G0 328 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 ATP6V0D2Q8N8Y2 350 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 CEP70Q8NHQ1 597 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 GATA6Q92908 595 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 LPPQ93052 612 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 CLPTM1LQ96KA5 538 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 BTBD9Q96Q07 612 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 ASB2Q96Q27 587 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 APOL2Q9BQE5 337 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 SLC39A8Q9C0K1 460 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 Q9H521 79 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 TMEM30AQ9NV96 361 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 CLIC5Q9NZA1 410 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 CPSF2Q9P2I0 782 aaKnown RBP9.43□□□□□ -0.9
BBS4-210ENST00000566400 PADI3Q9ULW8 664 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 NEU3Q9UQ49 428 aa9.43□□□□□ -0.9
BBS4-210ENST00000566400 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.42□□□□□ -0.9
BBS4-210ENST00000566400 MEIS3P2A8K0S8 358 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 MEI4A8MW99 385 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 KCNU1A8MYU2 1149 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 TARM1B6A8C7 271 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 TMEM189-UBE2V1I3L0A0 370 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 CASQ2O14958 399 aaPredicted RBP9.42□□□□□ -0.9
BBS4-210ENST00000566400 SLC7A4O43246 635 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 EOMESO95936 686 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 RHOQP17081 205 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 ARRB2P32121 409 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 PAPOLAP51003 745 aaKnown RBP9.42□□□□□ -0.9
BBS4-210ENST00000566400 NAGLUP54802 743 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 MLLT6P55198 1093 aaPredicted RBP9.42□□□□□ -0.9
BBS4-210ENST00000566400 NAA20P61599 178 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 OLIG2Q13516 323 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 POU6F1Q14863 301 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 DLG2Q15700 870 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 ARL13AQ5H913 290 aaPredicted RBP9.42□□□□□ -0.9
BBS4-210ENST00000566400 VWA5B1Q5TIE3 1220 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 NEPROQ6NW34 567 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 BNC2Q6ZN30 1099 aaPredicted RBP9.42□□□□□ -0.9
BBS4-210ENST00000566400 USP33Q8TEY7 942 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 PPP1R13LQ8WUF5 828 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 AZIN2Q96A70 460 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 ELMO2Q96JJ3 720 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 C8orf48Q96LL4 319 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 COMMD8Q9NX08 183 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 OSER1Q9NX31 292 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 UTP6Q9NYH9 597 aaKnown RBP9.42□□□□□ -0.9
BBS4-210ENST00000566400 UBP1Q9NZI7 540 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 DLGAP2Q9P1A6 1054 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 EPS15L1Q9UBC2 864 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 XPR1Q9UBH6 696 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 FBXO5Q9UKT4 447 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 SCML2Q9UQR0 700 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 WASF2Q9Y6W5 498 aa9.42□□□□□ -0.9
BBS4-210ENST00000566400 FNDC1Q4ZHG4 1894 aaPredicted RBP9.42□□□□□ -0.9
BBS4-210ENST00000566400 PATJQ8NI35 1801 aa9.41□□□□□ -0.9
BBS4-210ENST00000566400 LOC100653049A0A140TA62 436 aa9.41□□□□□ -0.9
BBS4-210ENST00000566400 DPPA5A6NC42 116 aa9.41□□□□□ -0.9
BBS4-210ENST00000566400 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.41□□□□□ -0.9
BBS4-210ENST00000566400 TK2O00142 265 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms