RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ARHGEF7Q14155 803 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 KNOP1Q1ED39 458 aaKnown RBP9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 KRBA2Q6ZNG9 492 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 ASB18Q6ZVZ8 466 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 PIM3Q86V86 326 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 GKN2Q86XP6 184 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 SH2D3CQ8N5H7 860 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 SLC4A11Q8NBS3 891 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 CCDC112Q8NEF3 446 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 ASB12Q8WXK4 309 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 IRGQQ8WZA9 623 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 FEM1AQ9BSK4 669 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 LRRC61Q9BV99 259 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 C1QTNF2Q9BXJ5 285 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 ASPSCR1Q9BZE9 553 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 INTS2Q9H0H0 1204 aaKnown RBP9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 GPN2Q9H9Y4 310 aaPredicted RBP9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 SERTAD1Q9UHV2 236 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 TLR6Q9Y2C9 796 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 PCDHGA3Q9Y5H0 932 aa9.23□□□□□ -0.93
VPS9D1-205ENST00000565452 LRRK1Q38SD2 2015 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 WIPF3A6NGB9 483 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 IGLON5A6NGN9 336 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 TULP2O00295 520 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 TOR1BO14657 336 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 ZW10O43264 779 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 TSPAN6O43657 245 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 ACTN4O43707 911 aaKnown RBP9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 MOCS2O96007 188 aaPredicted RBP9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 CTSLP07711 333 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 RNF224P0DH78 156 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 CCL4P13236 92 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 LCP1P13796 627 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 GLB1P16278 677 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 TACR2P21452 398 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 MAP4P27816 1152 aaKnown RBP9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 GRNP28799 593 aaKnown RBP9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 NUMBP49757 651 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 NEK3P51956 506 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 RAD23BP54727 409 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 DAOAP59103 153 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 CENPCQ03188 943 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 BST2Q10589 180 aaKnown RBP9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 NNTQ13423 1086 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 ARSIQ5FYB1 569 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 TPRG1LQ5T0D9 272 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 TTC39BQ5VTQ0 682 aaPredicted RBP9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 TIPARPQ7Z3E1 657 aaKnown RBP9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 ZC3H18Q86VM9 953 aaKnown RBP9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 SLITRK4Q8IW52 837 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 CCDC13Q8IYE1 715 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 CCAR2Q8N163 923 aaKnown RBP9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 ATP11CQ8NB49 1132 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 KYQ8NBH2 561 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 DENND6BQ8NEG7 585 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 OR2A12Q8NGT7 310 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 TATDN2Q93075 761 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 PAGE5Q96GU1 130 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 FAXDC2Q96IV6 333 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 FCRL2Q96LA5 508 aaPredicted RBP9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 SERPINB11Q96P15 392 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 KLF6Q99612 283 aaPredicted RBP9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 SEMA6CQ9H3T2 930 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 APOBEC3GQ9HC16 384 aaKnown RBP9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 CISHQ9NSE2 258 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 LMBRD1Q9NUN5 540 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 DMAC2Q9NW81 257 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 KCTD3Q9Y597 815 aa9.22□□□□□ -0.93
VPS9D1-205ENST00000565452 TMEM110-MUSTN1A8MSY1 372 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 F5H5T6 163 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 NEMP1O14524 444 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 HGSO14964 777 aaPredicted RBP9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 AP1G1O43747 822 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 RAD1O60671 282 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 SMC2O95347 1197 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 APOEP02649 317 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 LTFP02788 710 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 FGF3P11487 239 aaPredicted RBP9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 TCN2P20062 427 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 EIF4A3P38919 411 aaKnown RBP9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 KRT83P78385 493 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 C1QBPQ07021 282 aaKnown RBP9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 CDC20Q12834 499 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 C16orf72Q14CZ0 275 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 GOLGA7BQ2TAP0 167 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 EIF2S3LQ2VIR3 472 aaKnown RBP9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 CRTC2Q53ET0 693 aaPredicted RBP9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 EFHC2Q5JST6 749 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 RABGAP1LQ5R372 815 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 RAP1GAP2Q684P5 730 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 UNC13DQ70J99 1090 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 CHSY1Q86X52 802 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 SLC9A9Q8IVB4 645 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 PCDH19Q8TAB3 1148 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 PRR7Q8TB68 274 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 UBA3Q8TBC4 463 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 TMEM174Q8WUU8 243 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 ALG14Q96F25 216 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 SLC39A13Q96H72 371 aa9.21□□□□□ -0.94
VPS9D1-205ENST00000565452 BTN2A3PQ96KV6 586 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms