RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 NEBLO76041 1014 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 GFPT2O94808 682 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 LRIG2O94898 1065 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 GJB6O95452 261 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 CSF2P04141 144 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 UNGP13051 313 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-213ENST00000565173 NME1P15531 152 aaKnown RBP8.73□□□□□ -1.01
CAPN3-213ENST00000565173 RHOQP17081 205 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 EEF1GP26641 437 aaKnown RBP8.73□□□□□ -1.01
CAPN3-213ENST00000565173 ABL2P42684 1182 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 PTPN9P43378 593 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 DNA2P51530 1060 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 HDAC4P56524 1084 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 JAM2P57087 298 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 HNRNPKP61978 463 aaKnown RBP eCLIP8.73□□□□□ -1.01
CAPN3-213ENST00000565173 CDR2Q01850 454 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 MAPK8IP2Q13387 824 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-213ENST00000565173 CDO1Q16878 200 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 TBC1D25Q3MII6 688 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 CT47A1Q5JQC4 288 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-213ENST00000565173 KYAT3Q6YP21 454 aaKnown RBP8.73□□□□□ -1.01
CAPN3-213ENST00000565173 KDM7AQ6ZMT4 941 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 PHLDB2Q86SQ0 1253 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 ZNF677Q86XU0 584 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 DCP2Q8IU60 420 aaKnown RBP8.73□□□□□ -1.01
CAPN3-213ENST00000565173 CCDC185Q8N715 623 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 SLC30A5Q8TAD4 765 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 ENOX1Q8TC92 643 aaKnown RBP8.73□□□□□ -1.01
CAPN3-213ENST00000565173 GPT2Q8TD30 523 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 ASB12Q8WXK4 309 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 ARHGEF2Q92974 986 aaKnown RBP8.73□□□□□ -1.01
CAPN3-213ENST00000565173 CENPTQ96BT3 561 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 UBL7Q96S82 380 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-213ENST00000565173 PCDHB18PQ96TA0 734 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 TM6SF2Q9BZW4 377 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 NOL6Q9H6R4 1146 aaKnown RBP8.73□□□□□ -1.01
CAPN3-213ENST00000565173 TMEM248Q9NWD8 314 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 DNAI1Q9UI46 699 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 GGT7Q9UJ14 662 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 PNMA8BQ9ULN7 279 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-213ENST00000565173 TRPM6Q9BX84 2022 aa8.73□□□□□ -1.01
CAPN3-213ENST00000565173 TDRD6O60522 2096 aaKnown RBP8.73□□□□□ -1.01
CAPN3-213ENST00000565173 NEMP2A6NFY4 417 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 C16orf96A6NNT2 1141 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 PES1O00541 588 aaKnown RBP8.72□□□□□ -1.01
CAPN3-213ENST00000565173 AREL1O15033 823 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 RRP8O43159 456 aaKnown RBP8.72□□□□□ -1.01
CAPN3-213ENST00000565173 TSPAN6O43657 245 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 KDELR3O43731 214 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 C1QL1O75973 258 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 GSRP00390 522 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 GP1BAP07359 652 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 PLEKP08567 350 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-213ENST00000565173 RFC1P35251 1148 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-213ENST00000565173 SOX5P35711 763 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 RABIFP47224 123 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 MAPKAPK2P49137 400 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 PFN3P60673 137 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 DAB2P98082 770 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 TLE3Q04726 772 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 EIF2B5Q13144 721 aaKnown RBP8.72□□□□□ -1.01
CAPN3-213ENST00000565173 KRT31Q15323 416 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 MYLK3Q32MK0 819 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 ZNF805Q5CZA5 627 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 CDKAL1Q5VV42 579 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 LEKR1Q6ZMV7 388 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 LRRC69Q6ZNQ3 347 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 STRADAQ7RTN6 431 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 PTAR1Q7Z6K3 402 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-213ENST00000565173 PARGQ86W56 976 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 MSANTD4Q8NCY6 345 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 ZNF548Q8NEK5 533 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-213ENST00000565173 OR2AP1Q8NGE2 309 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 OR6K2Q8NGY2 324 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 HIC2Q96JB3 615 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 DUSP23Q9BVJ7 150 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 MAGEH1Q9H213 219 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 VPS16Q9H269 839 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 ZDHHC6Q9H6R6 413 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 DNAJC28Q9NX36 388 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 TAB2Q9NYJ8 693 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 CHMP5Q9NZZ3 219 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 DACH1Q9UI36 760 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 ITM2BQ9Y287 266 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 SIK3Q9Y2K2 1263 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 CSNK1G3Q9Y6M4 447 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 TENM4Q6N022 2769 aa8.72□□□□□ -1.01
CAPN3-213ENST00000565173 PTPRQQ9UMZ3 2332 aa8.71□□□□□ -1.01
CAPN3-213ENST00000565173 COL27A1Q8IZC6 1860 aaPredicted RBP8.71□□□□□ -1.01
CAPN3-213ENST00000565173 A0A1W2PNU3 283 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 TCRBV5S1A1TA0A578 114 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 TK2O00142 265 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 KRIT1O00522 736 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 FPGTO14772 594 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 LZTS3O60299 673 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 RAMP2O60895 175 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 GCATO75600 419 aa8.71□□□□□ -1.02
CAPN3-213ENST00000565173 DXOO77932 396 aaKnown RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 POP4O95707 220 aaKnown RBP8.71□□□□□ -1.02
CAPN3-213ENST00000565173 PRB1P04280 392 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms