RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 PAK4O96013 591 aaPredicted RBP24.29■■□□□ 1.48
NME3-206ENST00000564252 GKP32189 559 aa24.29■■□□□ 1.48
NME3-206ENST00000564252 GSCP56915 257 aaPredicted RBP24.29■■□□□ 1.48
NME3-206ENST00000564252 FKBP15Q5T1M5 1219 aa24.29■■□□□ 1.48
NME3-206ENST00000564252 KYAT3Q6YP21 454 aaKnown RBP24.29■■□□□ 1.48
NME3-206ENST00000564252 CLEC17AQ6ZS10 378 aa24.29■■□□□ 1.48
NME3-206ENST00000564252 DCP2Q8IU60 420 aaKnown RBP24.29■■□□□ 1.48
NME3-206ENST00000564252 DCBLD1Q8N8Z6 715 aa24.29■■□□□ 1.48
NME3-206ENST00000564252 FAM172AQ8WUF8 416 aa24.29■■□□□ 1.48
NME3-206ENST00000564252 CRELD1Q96HD1 420 aa24.29■■□□□ 1.48
NME3-206ENST00000564252 DCBLD2Q96PD2 775 aa24.29■■□□□ 1.48
NME3-206ENST00000564252 MAGEH1Q9H213 219 aa24.29■■□□□ 1.48
NME3-206ENST00000564252 CLCA2Q9UQC9 943 aa24.29■■□□□ 1.48
NME3-206ENST00000564252 AK5Q9Y6K8 562 aa24.29■■□□□ 1.48
NME3-206ENST00000564252 TLX3O43711 291 aaPredicted RBP24.28■■□□□ 1.48
NME3-206ENST00000564252 TPM2P07951 284 aa24.28■■□□□ 1.48
NME3-206ENST00000564252 PLEKP08567 350 aaPredicted RBP24.28■■□□□ 1.48
NME3-206ENST00000564252 STAT1P42224 750 aa24.28■■□□□ 1.48
NME3-206ENST00000564252 ABL2P42684 1182 aa24.28■■□□□ 1.48
NME3-206ENST00000564252 GEMIN4P57678 1058 aaKnown RBP24.28■■□□□ 1.48
NME3-206ENST00000564252 DAB2P98082 770 aa24.28■■□□□ 1.48
NME3-206ENST00000564252 SEMG2Q02383 582 aa24.28■■□□□ 1.48
NME3-206ENST00000564252 HS1BP3Q53T59 392 aa24.28■■□□□ 1.48
NME3-206ENST00000564252 RBM43Q6ZSC3 357 aaKnown RBP24.28■■□□□ 1.48
NME3-206ENST00000564252 OR6K2Q8NGY2 324 aa24.28■■□□□ 1.48
NME3-206ENST00000564252 NTAN1Q96AB6 310 aa24.28■■□□□ 1.48
NME3-206ENST00000564252 TBC1D31Q96DN5 1066 aa24.28■■□□□ 1.48
NME3-206ENST00000564252 FANCLQ9NW38 375 aa24.28■■□□□ 1.48
NME3-206ENST00000564252 C16orf96A6NNT2 1141 aa24.27■■□□□ 1.48
NME3-206ENST00000564252 GSRP00390 522 aa24.27■■□□□ 1.48
NME3-206ENST00000564252 KRT3P12035 628 aa24.27■■□□□ 1.48
NME3-206ENST00000564252 CKMT1AP12532 417 aa24.27■■□□□ 1.48
NME3-206ENST00000564252 RFC1P35251 1148 aaPredicted RBP24.27■■□□□ 1.48
NME3-206ENST00000564252 E2F1Q01094 437 aa24.27■■□□□ 1.48
NME3-206ENST00000564252 FZD2Q14332 565 aa24.27■■□□□ 1.48
NME3-206ENST00000564252 CLEC16AQ2KHT3 1053 aa24.27■■□□□ 1.48
NME3-206ENST00000564252 ZNF542PQ5EBM4 170 aa24.27■■□□□ 1.48
NME3-206ENST00000564252 ZSCAN30Q86W11 494 aa24.27■■□□□ 1.48
NME3-206ENST00000564252 OR2AP1Q8NGE2 309 aa24.27■■□□□ 1.48
NME3-206ENST00000564252 KLF6Q99612 283 aaPredicted RBP24.27■■□□□ 1.48
NME3-206ENST00000564252 C1QTNF2Q9BXJ5 285 aa24.27■■□□□ 1.48
NME3-206ENST00000564252 DNAJC28Q9NX36 388 aa24.27■■□□□ 1.48
NME3-206ENST00000564252 NLGN3Q9NZ94 848 aa24.27■■□□□ 1.48
NME3-206ENST00000564252 ADAM22Q9P0K1 906 aa24.27■■□□□ 1.48
NME3-206ENST00000564252 GGT7Q9UJ14 662 aa24.27■■□□□ 1.48
NME3-206ENST00000564252 BPTFQ12830 3046 aa24.26■■□□□ 1.47
NME3-206ENST00000564252 SPINT1O43278 529 aa24.26■■□□□ 1.47
NME3-206ENST00000564252 TSPAN6O43657 245 aa24.26■■□□□ 1.47
NME3-206ENST00000564252 RAMP2O60895 175 aa24.26■■□□□ 1.47
NME3-206ENST00000564252 EIF2S3P41091 472 aaKnown RBP24.26■■□□□ 1.47
NME3-206ENST00000564252 NSFP46459 744 aaKnown RBP24.26■■□□□ 1.47
NME3-206ENST00000564252 COPB1P53618 953 aaKnown RBP24.26■■□□□ 1.47
NME3-206ENST00000564252 SYCP1Q15431 976 aa24.26■■□□□ 1.47
NME3-206ENST00000564252 ZNF805Q5CZA5 627 aa24.26■■□□□ 1.47
NME3-206ENST00000564252 WDR59Q6PJI9 974 aa24.26■■□□□ 1.47
NME3-206ENST00000564252 LEKR1Q6ZMV7 388 aa24.26■■□□□ 1.47
NME3-206ENST00000564252 TMC6Q7Z403 805 aa24.26■■□□□ 1.47
NME3-206ENST00000564252 PHF13Q86YI8 300 aaPredicted RBP24.26■■□□□ 1.47
NME3-206ENST00000564252 RYBPQ8N488 228 aaPredicted RBP24.26■■□□□ 1.47
NME3-206ENST00000564252 RAB7BQ96AH8 199 aa24.26■■□□□ 1.47
NME3-206ENST00000564252 LENG8Q96PV6 779 aaPredicted RBP24.26■■□□□ 1.47
NME3-206ENST00000564252 HPCAL4Q9UM19 191 aa24.26■■□□□ 1.47
NME3-206ENST00000564252 LY6G6EA0A0G2JKS1 128 aa24.25■■□□□ 1.47
NME3-206ENST00000564252 SPTY2D1-AS1A0A0U1RR47 76 aa24.25■■□□□ 1.47
NME3-206ENST00000564252 IGLON5A6NGN9 336 aa24.25■■□□□ 1.47
NME3-206ENST00000564252 SCAMP1O15126 338 aa24.25■■□□□ 1.47
NME3-206ENST00000564252 ALPPL2P10696 532 aa24.25■■□□□ 1.47
NME3-206ENST00000564252 GPD1P21695 349 aa24.25■■□□□ 1.47
NME3-206ENST00000564252 ABCG1P45844 678 aa24.25■■□□□ 1.47
NME3-206ENST00000564252 RABIFP47224 123 aa24.25■■□□□ 1.47
NME3-206ENST00000564252 HNRNPKP61978 463 aaKnown RBP eCLIP24.25■■□□□ 1.47
NME3-206ENST00000564252 SNRPD1P62314 119 aaKnown RBP24.25■■□□□ 1.47
NME3-206ENST00000564252 POLD3Q15054 466 aaPredicted RBP24.25■■□□□ 1.47
NME3-206ENST00000564252 C3orf20Q8ND61 904 aa24.25■■□□□ 1.47
NME3-206ENST00000564252 APOLD1Q96LR9 279 aa24.25■■□□□ 1.47
NME3-206ENST00000564252 BBC3Q96PG8 261 aaPredicted RBP24.25■■□□□ 1.47
NME3-206ENST00000564252 SELENOOQ9BVL4 669 aa24.25■■□□□ 1.47
NME3-206ENST00000564252 NOL6Q9H6R4 1146 aaKnown RBP24.25■■□□□ 1.47
NME3-206ENST00000564252 ITM2BQ9Y287 266 aa24.25■■□□□ 1.47
NME3-206ENST00000564252 U3KQA8 63 aa24.25■■□□□ 1.47
NME3-206ENST00000564252 NEMP2A6NFY4 417 aa24.24■■□□□ 1.47
NME3-206ENST00000564252 KRIT1O00522 736 aa24.24■■□□□ 1.47
NME3-206ENST00000564252 KDELR3O43731 214 aa24.24■■□□□ 1.47
NME3-206ENST00000564252 MT-CO3P00414 261 aa24.24■■□□□ 1.47
NME3-206ENST00000564252 CSF2P04141 144 aa24.24■■□□□ 1.47
NME3-206ENST00000564252 CALB1P05937 261 aa24.24■■□□□ 1.47
NME3-206ENST00000564252 UGT2B4P06133 528 aa24.24■■□□□ 1.47
NME3-206ENST00000564252 NME1P15531 152 aaKnown RBP24.24■■□□□ 1.47
NME3-206ENST00000564252 ITPKBP27987 946 aa24.24■■□□□ 1.47
NME3-206ENST00000564252 SGCGQ13326 291 aa24.24■■□□□ 1.47
NME3-206ENST00000564252 MYLK3Q32MK0 819 aa24.24■■□□□ 1.47
NME3-206ENST00000564252 MON1BQ7L1V2 547 aa24.24■■□□□ 1.47
NME3-206ENST00000564252 PARGQ86W56 976 aa24.24■■□□□ 1.47
NME3-206ENST00000564252 PYROXD2Q8N2H3 581 aa24.24■■□□□ 1.47
NME3-206ENST00000564252 FAM181AQ8N9Y4 354 aa24.24■■□□□ 1.47
NME3-206ENST00000564252 ZNF548Q8NEK5 533 aaPredicted RBP24.24■■□□□ 1.47
NME3-206ENST00000564252 ASB12Q8WXK4 309 aa24.24■■□□□ 1.47
NME3-206ENST00000564252 LIMA1Q9UHB6 759 aaKnown RBP24.24■■□□□ 1.47
NME3-206ENST00000564252 TCRBV5S1A1TA0A578 114 aa24.23■■□□□ 1.47
NME3-206ENST00000564252 SIGLEC16A6NMB1 481 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms