RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 SLC4A1P02730 911 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 YBX3P16989 372 aaKnown RBP eCLIP11.97□□□□□ -0.49
ABCA3-203ENST00000563623 TKTP29401 623 aaKnown RBP11.97□□□□□ -0.49
ABCA3-203ENST00000563623 NOS2P35228 1153 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 SLC26A2P50443 739 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 C16orf72Q14CZ0 275 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 KYAT1Q16773 422 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 ZNF470Q6ECI4 717 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 ZNF410Q86VK4 478 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 CYGBQ8WWM9 190 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 NACA2Q9H009 215 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 CDHR5Q9HBB8 845 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 NCKIPSDQ9NZQ3 722 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 VTI1BQ9UEU0 232 aa11.97□□□□□ -0.49
ABCA3-203ENST00000563623 COL11A1P12107 1806 aaPredicted RBP11.96□□□□□ -0.49
ABCA3-203ENST00000563623 ZCWPW2A0A1B0GU75 182 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 FAM149AA5PLN7 773 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 TRPC5OSA6NMA1 111 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 PSMD12O00232 456 aaPredicted RBP11.96□□□□□ -0.49
ABCA3-203ENST00000563623 RPS12P25398 132 aaKnown RBP11.96□□□□□ -0.49
ABCA3-203ENST00000563623 ADRA1BP35368 520 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 GRIA3P42263 894 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 GLUD2P49448 558 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 STX5Q13190 355 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 ARL13BQ3SXY8 428 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 MGAT5BQ3V5L5 792 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 NAPEPLDQ6IQ20 393 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 C16orf87Q6PH81 154 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 FAM47BQ8NA70 645 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 KBTBD7Q8WVZ9 684 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 DLG3Q92796 817 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 HSPBAP1Q96EW2 488 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 FSD1LQ9BXM9 530 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 IGSF9Q9P2J2 1179 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 RSL24D1Q9UHA3 163 aaKnown RBP11.96□□□□□ -0.49
ABCA3-203ENST00000563623 PHF24Q9UPV7 400 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 MYRFQ9Y2G1 1151 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 TDRKHQ9Y2W6 561 aaKnown RBP11.96□□□□□ -0.49
ABCA3-203ENST00000563623 SCN1AP35498 2009 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 CROCCQ5TZA2 2017 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 LTBP4Q8N2S1 1624 aa11.96□□□□□ -0.49
ABCA3-203ENST00000563623 H3BRB1 525 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 GIPC1O14908 333 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 FOXD2O60548 495 aaPredicted RBP11.96□□□□□ -0.5
ABCA3-203ENST00000563623 SRP72O76094 671 aaKnown RBP11.96□□□□□ -0.5
ABCA3-203ENST00000563623 USP17L7P0C7H9 530 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 ARL1P40616 181 aaPredicted RBP11.96□□□□□ -0.5
ABCA3-203ENST00000563623 CSE1LP55060 971 aaKnown RBP11.96□□□□□ -0.5
ABCA3-203ENST00000563623 CDH17Q12864 832 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 ZBTB17Q13105 803 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 LAMC2Q13753 1193 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 PKDCCQ504Y2 493 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 C9orf57Q5W0N0 161 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 TTC33Q6PID6 262 aaPredicted RBP11.96□□□□□ -0.5
ABCA3-203ENST00000563623 OR9I1Q8NGQ6 314 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 OR6P1Q8NGX9 317 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 PBXIP1Q96AQ6 731 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 HDAC11Q96DB2 347 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 CNDP1Q96KN2 507 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 TUT1Q9H6E5 874 aaKnown RBP11.96□□□□□ -0.5
ABCA3-203ENST00000563623 ZBTB26Q9HCK0 441 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 TLL2Q9Y6L7 1015 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 SLCO1B7G3V0H7 640 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 BCAS2O75934 225 aaPredicted RBP11.96□□□□□ -0.5
ABCA3-203ENST00000563623 BEST1O76090 585 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 SUPT7LO94864 414 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 AHSGP02765 367 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 EDNRBP24530 442 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 NPY2RP49146 381 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 CCNA1P78396 465 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 ESRP1Q6NXG1 681 aaKnown RBP11.96□□□□□ -0.5
ABCA3-203ENST00000563623 UNC93AQ86WB7 457 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 IL22Q9GZX6 179 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 RHOJQ9H4E5 214 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 ARHGEF38Q9NXL2 777 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 EGFL7Q9UHF1 273 aa11.96□□□□□ -0.5
ABCA3-203ENST00000563623 HSPA8P11142 646 aaKnown RBP11.95□□□□□ -0.5
ABCA3-203ENST00000563623 SLC5A2P31639 672 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 EPHX2P34913 555 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 GRM5P41594 1212 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 PPP1R3AQ16821 1122 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 FAM83EQ2M2I3 478 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 MOB2Q70IA6 237 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 ZC3HC1Q86WB0 502 aaKnown RBP11.95□□□□□ -0.5
ABCA3-203ENST00000563623 KCNN1Q92952 543 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 HSFY1Q96LI6 401 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 MLPHQ9BV36 600 aaPredicted RBP11.95□□□□□ -0.5
ABCA3-203ENST00000563623 BRD8Q9H0E9 1235 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 TXNRD2Q9NNW7 524 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 GMPR2Q9P2T1 348 aaKnown RBP11.95□□□□□ -0.5
ABCA3-203ENST00000563623 ZNF112Q9UJU3 913 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 NR5A2O00482 541 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 MOCS2O96007 188 aaPredicted RBP11.95□□□□□ -0.5
ABCA3-203ENST00000563623 LRPAP1P30533 357 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 ADCYAP1R1P41586 468 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 TAF6P49848 677 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 SLC7A2P52569 658 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 TAS2R39P59534 338 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 CLEC6AQ6EIG7 209 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 B3GALNT2Q8NCR0 500 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms