RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 PARS2Q7L3T8 475 aaKnown RBP15.04■□□□□ -0
RPUSD1-204ENST00000563560 ZNF564Q8TBZ8 553 aaPredicted RBP15.04■□□□□ -0
RPUSD1-204ENST00000563560 GRIN3AQ8TCU5 1115 aa15.04■□□□□ -0
RPUSD1-204ENST00000563560 GANCQ8TET4 914 aa15.04■□□□□ -0
RPUSD1-204ENST00000563560 CSPG4P5Q96PW8 444 aa15.04■□□□□ -0
RPUSD1-204ENST00000563560 GTPBP2Q9BX10 602 aaKnown RBP15.04■□□□□ -0
RPUSD1-204ENST00000563560 NHEJ1Q9H9Q4 299 aaPredicted RBP15.04■□□□□ -0
RPUSD1-204ENST00000563560 PCDH18Q9HCL0 1135 aa15.04■□□□□ -0
RPUSD1-204ENST00000563560 PREBQ9HCU5 417 aa15.04■□□□□ -0
RPUSD1-204ENST00000563560 IP6K2Q9UHH9 426 aa15.04■□□□□ -0
RPUSD1-204ENST00000563560 TPX2Q9ULW0 747 aaKnown RBP15.04■□□□□ -0
RPUSD1-204ENST00000563560 ANKRD6Q9Y2G4 727 aa15.04■□□□□ -0
RPUSD1-204ENST00000563560 ACACBO00763 2458 aa15.04■□□□□ -0
RPUSD1-204ENST00000563560 FAM47DPA6NHR8 397 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 KPNA3O00505 521 aaPredicted RBP15.03■□□□□ -0
RPUSD1-204ENST00000563560 INSIG1O15503 277 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 AP1G1O43747 822 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 PROSCO94903 275 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 CD48P09326 243 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 TMEM253P0C7T8 217 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 ADRB3P13945 408 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 FECHP22830 423 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 ABL2P42684 1182 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 RGRP47804 291 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 PAPOLAP51003 745 aaKnown RBP15.03■□□□□ -0
RPUSD1-204ENST00000563560 FAM193AP78312 1265 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 FGL2Q14314 439 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 MYLK3Q32MK0 819 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 PPP6R3Q5H9R7 873 aaPredicted RBP15.03■□□□□ -0
RPUSD1-204ENST00000563560 ATXN7L2Q5T6C5 722 aaPredicted RBP15.03■□□□□ -0
RPUSD1-204ENST00000563560 N4BP2L1Q5TBK1 243 aaPredicted RBP15.03■□□□□ -0
RPUSD1-204ENST00000563560 NEK5Q6P3R8 708 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 OR6K2Q8NGY2 324 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 SNX19Q92543 992 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 CELF6Q96J87 481 aaKnown RBP15.03■□□□□ -0
RPUSD1-204ENST00000563560 LRIG1Q96JA1 1093 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 CCDC114Q96M63 670 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.03■□□□□ -0
RPUSD1-204ENST00000563560 SPTLC3Q9NUV7 552 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 UVRAGQ9P2Y5 699 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 FADS3Q9Y5Q0 445 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 PTPRBP23467 1997 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 LRP4O75096 1905 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 FREM2Q5SZK8 3169 aa15.03■□□□□ -0
RPUSD1-204ENST00000563560 TSPAN11A1L157 253 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 AREL1O15033 823 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 BUB1O43683 1085 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 OPHN1O60890 802 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 LCA5LO95447 670 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 H2AFZP0C0S5 128 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 CEACAM1P13688 526 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 DESP17661 470 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 PMLP29590 882 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 SNRPD1P62314 119 aaKnown RBP15.02■□□□□ -0
RPUSD1-204ENST00000563560 ATP13A4Q4VNC1 1196 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 NAPEPLDQ6IQ20 393 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 PSAPL1Q6NUJ1 521 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 H2AFVQ71UI9 128 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 SPATS2Q86XZ4 545 aaKnown RBP15.02■□□□□ -0
RPUSD1-204ENST00000563560 FAF2Q96CS3 445 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 CPEB1Q9BZB8 566 aaKnown RBP15.02■□□□□ -0
RPUSD1-204ENST00000563560 ZDHHC6Q9H6R6 413 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 GAREM1Q9H706 876 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 GPR27Q9NS67 375 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 HPCAL4Q9UM19 191 aa15.02■□□□□ -0
RPUSD1-204ENST00000563560 FARP1Q9Y4F1 1045 aaPredicted RBP15.02■□□□□ -0
RPUSD1-204ENST00000563560 TPRP12270 2363 aaKnown RBP15.02□□□□□ -0.01
RPUSD1-204ENST00000563560 KMT2BQ9UMN6 2715 aaPredicted RBP15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 TBC1D3DA0A087WVF3 549 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 TBC1D3IA0A087WXS9 549 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 TBC1D3EA0A087X179 549 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 TBC1D3KA0A087X1G2 549 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 TBC1D3FA6NER0 549 aaPredicted RBP15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 C16orf96A6NNT2 1141 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 TBC1D3LB9A6J9 549 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 AKR1B15C9JRZ8 316 aaPredicted RBP15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 H0Y8X5 98 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 MYO1FO00160 1098 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 MUSKO15146 869 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 BUB1BO60566 1050 aaPredicted RBP15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 RNGTTO60942 597 aaKnown RBP15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 POP4O95707 220 aaKnown RBP15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 TBC1D3HP0C7X1 549 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 AMPD1P23109 780 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 MAN1A1P33908 653 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 NUDT1P36639 197 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 NEK3P51956 506 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 DPYSL3Q14195 570 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 UAP1L1Q3KQV9 507 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 ZNF805Q5CZA5 627 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 TBC1D3GQ6DHY5 549 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 TBC1D3CQ6IPX1 549 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 IL27RAQ6UWB1 636 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 KANSL1Q7Z3B3 1105 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 HORMAD1Q86X24 394 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 ZSWIM9Q86XI8 627 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 CNGA4Q8IV77 575 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 TBC1D3Q8IZP1 549 aaPredicted RBP15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 DEFB124Q8NES8 71 aa15.01□□□□□ -0.01
RPUSD1-204ENST00000563560 MRFAP1L1Q96HT8 127 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms