RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 MFAP4P55083 255 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 NME5P56597 212 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 ACTR1AP61163 376 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 RPS8P62241 208 aaKnown RBP5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 OLR1P78380 273 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 MEF2AQ02078 507 aaPredicted RBP5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 FHL3Q13643 280 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 GCKRQ14397 625 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 DGKDQ16760 1214 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 GEN1Q17RS7 908 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 PROSER3Q2NL68 480 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 LETM2Q2VYF4 491 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 MYLK3Q32MK0 819 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 ANKRD20A4Q4UJ75 823 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 ANKRD20A8PQ5CZ79 823 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 ANKRD20A2Q5SQ80 823 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 ANKRD20A1Q5TYW2 823 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 ANKRD20A3Q5VUR7 823 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 TBC1D9BQ66K14 1250 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 DENND1BQ6P3S1 775 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 PTF1AQ7RTS3 328 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 USP37Q86T82 979 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 ITPRIPQ8IWB1 547 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 LILRA3Q8N6C8 439 aaPredicted RBP5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 PIK3C3Q8NEB9 887 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 SHCBP1Q8NEM2 672 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 OR5AN1Q8NGI8 311 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 ZNF480Q8WV37 535 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 ASB11Q8WXH4 323 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 DYDC2Q96IM9 177 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 GDAP1L1Q96MZ0 367 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 PPP1R10Q96QC0 940 aaKnown RBP5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 GAD1Q99259 594 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 PLA2G12BQ9BX93 195 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 CACNG6Q9BXT2 260 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 C11orf54Q9H0W9 315 aaPredicted RBP5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 DPH5Q9H2P9 285 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 CCDC134Q9H6E4 229 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 MMRN2Q9H8L6 949 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 XPNPEP3Q9NQH7 507 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 MBNL1Q9NR56 388 aaKnown RBP5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 ABCB8Q9NUT2 735 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 DNMT3BQ9UBC3 853 aaKnown RBP5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 RBPJLQ9UBG7 517 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 SUN2Q9UH99 717 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 BAG5Q9UL15 447 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 PALD1Q9ULE6 856 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 PPIEQ9UNP9 301 aaKnown RBP5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 TMED5Q9Y3A6 229 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 JRKLQ9Y4A0 524 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 SQORQ9Y6N5 450 aa5.37□□□□□ -1.55
VPS35P1-201ENST00000563400 LY75O60449 1722 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 ARPC4-TTLL3A0A0A6YYG9 625 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 A0A1W2PQF6 199 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 GAGE10A6NGK3 116 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 ZNF785A8K8V0 405 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 M0QYT0 321 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 SNAP23O00161 211 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 FRAT2O75474 233 aaPredicted RBP5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 DDAH2O95865 285 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 ONECUT2O95948 504 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 HMGCRP04035 888 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 MSL3P1P0C860 447 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 SLC6A4P31645 630 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 ASMTP46597 345 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 ALDH1A3P47895 512 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 CDK7P50613 346 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 BMXP51813 675 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 EPHB4P54760 987 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 FAM3BP58499 235 aaPredicted RBP5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 RNASELQ05823 741 aaKnown RBP5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 RUNX1T1Q06455 604 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 TUBB3Q13509 450 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 CUL2Q13617 745 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 IL11RAQ14626 422 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 GAB4Q2WGN9 574 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 ZNF750Q32MQ0 723 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 COLEC12Q5KU26 742 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 C12orf60Q5U649 245 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 CACHD1Q5VU97 1274 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 CD276Q5ZPR3 534 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 CDC73Q6P1J9 531 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 MSANTD2Q6P1R3 559 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 MTHFD1LQ6UB35 978 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 ATG14Q6ZNE5 492 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 ADCK1Q86TW2 530 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 TRABD2AQ86V40 505 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 TMEM200AQ86VY9 491 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 ZNF280BQ86YH2 543 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 PLXDC1Q8IUK5 500 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 TMEM151BQ8IW70 566 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 PLD5Q8N7P1 536 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 ZNF366Q8N895 744 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 RFWD2Q8NHY2 731 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 ST7LQ8TDW4 575 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 POMGNT1Q8WZA1 660 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 TUBGCP3Q96CW5 907 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 FCRL2Q96LA5 508 aaPredicted RBP5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 FAM227BQ96M60 508 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 KLHL15Q96M94 604 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms