RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 ARL4AP40617 200 aa28.75■■■□□ 2.19
NME3-203ENST00000563367 SSR1P43307 286 aaKnown RBP28.75■■■□□ 2.19
NME3-203ENST00000563367 SNRPD1P62314 119 aaKnown RBP28.75■■■□□ 2.19
NME3-203ENST00000563367 MYLK3Q32MK0 819 aa28.75■■■□□ 2.19
NME3-203ENST00000563367 TSC1Q92574 1164 aa28.75■■■□□ 2.19
NME3-203ENST00000563367 CSPG4P5Q96PW8 444 aa28.75■■■□□ 2.19
NME3-203ENST00000563367 ZDHHC5Q9C0B5 715 aa28.75■■■□□ 2.19
NME3-203ENST00000563367 PCDH18Q9HCL0 1135 aa28.75■■■□□ 2.19
NME3-203ENST00000563367 ETNK2Q9NVF9 386 aa28.75■■■□□ 2.19
NME3-203ENST00000563367 CABIN1Q9Y6J0 2220 aa28.75■■■□□ 2.19
NME3-203ENST00000563367 ARHGAP42A6NI28 874 aa28.74■■■□□ 2.19
NME3-203ENST00000563367 KRIT1O00522 736 aa28.74■■■□□ 2.19
NME3-203ENST00000563367 OPHN1O60890 802 aa28.74■■■□□ 2.19
NME3-203ENST00000563367 GJB3O75712 270 aa28.74■■■□□ 2.19
NME3-203ENST00000563367 ITGB7P26010 798 aa28.74■■■□□ 2.19
NME3-203ENST00000563367 MAT2AP31153 395 aaKnown RBP28.74■■■□□ 2.19
NME3-203ENST00000563367 GRIA4P48058 902 aa28.74■■■□□ 2.19
NME3-203ENST00000563367 ATP13A4Q4VNC1 1196 aa28.74■■■□□ 2.19
NME3-203ENST00000563367 ARHGAP36Q6ZRI8 547 aa28.74■■■□□ 2.19
NME3-203ENST00000563367 PPP1R16AQ96I34 528 aa28.74■■■□□ 2.19
NME3-203ENST00000563367 IL21RQ9HBE5 538 aa28.74■■■□□ 2.19
NME3-203ENST00000563367 DNAAF2Q9NVR5 837 aaKnown RBP28.74■■■□□ 2.19
NME3-203ENST00000563367 LHX3Q9UBR4 397 aa28.74■■■□□ 2.19
NME3-203ENST00000563367 UBA2Q9UBT2 640 aaPredicted RBP28.74■■■□□ 2.19
NME3-203ENST00000563367 POP4O95707 220 aaKnown RBP28.73■■■□□ 2.19
NME3-203ENST00000563367 TAS2R40P59535 323 aa28.73■■■□□ 2.19
NME3-203ENST00000563367 RHOAP61586 193 aa28.73■■■□□ 2.19
NME3-203ENST00000563367 RACK1P63244 317 aaKnown RBP28.73■■■□□ 2.19
NME3-203ENST00000563367 TEAD4Q15561 434 aa28.73■■■□□ 2.19
NME3-203ENST00000563367 KIF19Q2TAC6 998 aa28.73■■■□□ 2.19
NME3-203ENST00000563367 PARS2Q7L3T8 475 aaKnown RBP28.73■■■□□ 2.19
NME3-203ENST00000563367 TRIM69Q86WT6 500 aa28.73■■■□□ 2.19
NME3-203ENST00000563367 SLC35G2Q8TBE7 412 aa28.73■■■□□ 2.19
NME3-203ENST00000563367 MRFAP1L1Q96HT8 127 aa28.73■■■□□ 2.19
NME3-203ENST00000563367 GDAP1L1Q96MZ0 367 aa28.73■■■□□ 2.19
NME3-203ENST00000563367 PREBQ9HCU5 417 aa28.73■■■□□ 2.19
NME3-203ENST00000563367 SNX11Q9Y5W9 270 aa28.73■■■□□ 2.19
NME3-203ENST00000563367 DFFAO00273 331 aa28.72■■■□□ 2.19
NME3-203ENST00000563367 RNGTTO60942 597 aaKnown RBP28.72■■■□□ 2.19
NME3-203ENST00000563367 WNT1P04628 370 aa28.72■■■□□ 2.19
NME3-203ENST00000563367 CD48P09326 243 aa28.72■■■□□ 2.19
NME3-203ENST00000563367 IL4RP24394 825 aa28.72■■■□□ 2.19
NME3-203ENST00000563367 ARSEP51690 589 aa28.72■■■□□ 2.19
NME3-203ENST00000563367 CCDC15Q0P6D6 951 aa28.72■■■□□ 2.19
NME3-203ENST00000563367 HADHQ16836 314 aaKnown RBP28.72■■■□□ 2.19
NME3-203ENST00000563367 FAM71BQ8TC56 605 aa28.72■■■□□ 2.19
NME3-203ENST00000563367 LRIG1Q96JA1 1093 aa28.72■■■□□ 2.19
NME3-203ENST00000563367 EXOC2Q96KP1 924 aa28.72■■■□□ 2.19
NME3-203ENST00000563367 TPX2Q9ULW0 747 aaKnown RBP28.72■■■□□ 2.19
NME3-203ENST00000563367 ANKRD6Q9Y2G4 727 aa28.72■■■□□ 2.19
NME3-203ENST00000563367 TMEM110-MUSTN1A8MSY1 372 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 INSIG1O15503 277 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 KCNK5O95279 499 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 IGSF6O95976 241 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 UGT2B4P06133 528 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 ADRB3P13945 408 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 KCNA4P22459 653 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 GJC1P36383 396 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 NEK3P51956 506 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 CDH6P55285 790 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 MMRN1Q13201 1228 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 KRT81Q14533 505 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 HLA-BQ31612 363 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 PRPF39Q86UA1 669 aaKnown RBP28.71■■■□□ 2.19
NME3-203ENST00000563367 LZTR1Q8N653 840 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 SERAC1Q96JX3 654 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 GAREM1Q9H706 876 aa28.71■■■□□ 2.19
NME3-203ENST00000563367 A0A1W2PQU0 124 aa28.7■■■□□ 2.18
NME3-203ENST00000563367 GIPC1O14908 333 aa28.7■■■□□ 2.18
NME3-203ENST00000563367 CD59P13987 128 aa28.7■■■□□ 2.18
NME3-203ENST00000563367 MESDQ14696 234 aa28.7■■■□□ 2.18
NME3-203ENST00000563367 ZNF805Q5CZA5 627 aa28.7■■■□□ 2.18
NME3-203ENST00000563367 FBXL19Q6PCT2 694 aa28.7■■■□□ 2.18
NME3-203ENST00000563367 TMCO3Q6UWJ1 677 aa28.7■■■□□ 2.18
NME3-203ENST00000563367 KLK6Q92876 244 aa28.7■■■□□ 2.18
NME3-203ENST00000563367 AASDHPPTQ9NRN7 309 aa28.7■■■□□ 2.18
NME3-203ENST00000563367 FNDC3AQ9Y2H6 1198 aaKnown RBP28.7■■■□□ 2.18
NME3-203ENST00000563367 A0A1W2PR77 199 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 C16orf96A6NNT2 1141 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 KCNK3O14649 394 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 VILLO15195 856 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 MAN1A1P33908 653 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 PSAPL1Q6NUJ1 521 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 NEK5Q6P3R8 708 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 IL27RAQ6UWB1 636 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 GDPD4Q6W3E5 623 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 ADAT2Q7Z6V5 191 aaKnown RBP28.69■■■□□ 2.18
NME3-203ENST00000563367 PIP4P1Q86T03 277 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 DEFB124Q8NES8 71 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 KLHL32Q96NJ5 620 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 SP110Q9HB58 689 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 KLHL11Q9NVR0 708 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 IPO11Q9UI26 975 aaKnown RBP28.69■■■□□ 2.18
NME3-203ENST00000563367 LCMT1Q9UIC8 334 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 ZFR2Q9UPR6 939 aaKnown RBP28.69■■■□□ 2.18
NME3-203ENST00000563367 FADS3Q9Y5Q0 445 aa28.69■■■□□ 2.18
NME3-203ENST00000563367 MTA2O94776 668 aa28.68■■■□□ 2.18
NME3-203ENST00000563367 PCDH8O95206 1070 aa28.68■■■□□ 2.18
NME3-203ENST00000563367 CSRP1P21291 193 aaKnown RBP28.68■■■□□ 2.18
NME3-203ENST00000563367 CD38P28907 300 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms