RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 NPY2RP49146 381 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 GEMIN4P57678 1058 aaKnown RBP9.86□□□□□ -0.83
UBFD1-202ENST00000563366 CYP4F8P98187 520 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 NAB1Q13506 487 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 ZNF235Q14590 738 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 FASTKD3Q14CZ7 662 aaKnown RBP9.86□□□□□ -0.83
UBFD1-202ENST00000563366 SLC14A2Q15849 920 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 MPPE1Q53F39 396 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 EMC10Q5UCC4 262 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 KCTD11Q693B1 232 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 RFWD3Q6PCD5 774 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 Q6ZNB5 142 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 CYS1Q717R9 158 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 TP53INP2Q8IXH6 220 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 TEX26Q8N6G2 289 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 MAB21L3Q8N8X9 362 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 DNAAF3Q8N9W5 541 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 GSDMBQ8TAX9 411 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 ZSCAN18Q8TBC5 510 aaPredicted RBP9.86□□□□□ -0.83
UBFD1-202ENST00000563366 EPS8L3Q8TE67 593 aaKnown RBP9.86□□□□□ -0.83
UBFD1-202ENST00000563366 SLC22A17Q8WUG5 538 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 DEPDC1BQ8WUY9 529 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 CDKL2Q92772 493 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 ARL8AQ96BM9 186 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 PABPC5Q96DU9 382 aaKnown RBP9.86□□□□□ -0.83
UBFD1-202ENST00000563366 STAMBPL1Q96FJ0 436 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 PRICKLE1Q96MT3 831 aaPredicted RBP9.86□□□□□ -0.83
UBFD1-202ENST00000563366 PWWP2AQ96N64 755 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 EBNA1BP2Q99848 306 aaKnown RBP9.86□□□□□ -0.83
UBFD1-202ENST00000563366 FSD1LQ9BXM9 530 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 CEP41Q9BYV8 373 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 POLR1EQ9GZS1 481 aaKnown RBP9.86□□□□□ -0.83
UBFD1-202ENST00000563366 IL22Q9GZX6 179 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 SLC25A51Q9H1U9 297 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 TASP1Q9H6P5 420 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 NOL6Q9H6R4 1146 aaKnown RBP9.86□□□□□ -0.83
UBFD1-202ENST00000563366 KIF9Q9HAQ2 790 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 GLOD4Q9HC38 313 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 GKN1Q9NS71 199 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 DZANK1Q9NVP4 752 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 RBM22Q9NW64 420 aaKnown RBP eCLIP9.86□□□□□ -0.83
UBFD1-202ENST00000563366 SMPD4Q9NXE4 827 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 ZDHHC3Q9NYG2 299 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 BCCIPQ9P287 314 aaKnown RBP eCLIP9.86□□□□□ -0.83
UBFD1-202ENST00000563366 PSMC3IPQ9P2W1 217 aaPredicted RBP9.86□□□□□ -0.83
UBFD1-202ENST00000563366 ACTL7BQ9Y614 415 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 MAD1L1Q9Y6D9 718 aa9.86□□□□□ -0.83
UBFD1-202ENST00000563366 GOLGA6L7A0A1B0GV03 622 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 H0Y626 953 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 ST8SIA5O15466 376 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 RHOP08100 348 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 TCF3P15923 654 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 PGAM1P18669 254 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 MPSTP25325 297 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 CD68P34810 354 aaPredicted RBP9.85□□□□□ -0.83
UBFD1-202ENST00000563366 IRAK1P51617 712 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 GAD2Q05329 585 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 SLC12A1Q13621 1099 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 CDH18Q13634 790 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 CAMK1Q14012 370 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 LBRQ14739 615 aaKnown RBP9.85□□□□□ -0.83
UBFD1-202ENST00000563366 LONRF1Q17RB8 773 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 GPR158Q5T848 1215 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 LGSNQ5TDP6 509 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 KCTD16Q68DU8 428 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 IL31Q6EBC2 164 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 CASC4Q6P4E1 433 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 KDM7AQ6ZMT4 941 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 ZNF534Q76KX8 674 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 CIR1Q86X95 450 aaPredicted RBP9.85□□□□□ -0.83
UBFD1-202ENST00000563366 CMTM8Q8IZV2 173 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 CNTD1Q8N815 330 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 UHMK1Q8TAS1 419 aaKnown RBP9.85□□□□□ -0.83
UBFD1-202ENST00000563366 ARHGEF2Q92974 986 aaKnown RBP9.85□□□□□ -0.83
UBFD1-202ENST00000563366 TLCD1Q96CP7 247 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 OTUB2Q96DC9 234 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 TMA16Q96EY4 203 aaKnown RBP9.85□□□□□ -0.83
UBFD1-202ENST00000563366 SIGLEC10Q96LC7 697 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 CYP2S1Q96SQ9 504 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 MUC3BQ9H195 1237 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 SFXN1Q9H9B4 322 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 SLC28A3Q9HAS3 691 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 PIDD1Q9HB75 910 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 CASS4Q9NQ75 786 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 CFAP97Q9P2B7 532 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 TBC1D14Q9P2M4 693 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 ADAM21Q9UKJ8 722 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 TTLL3Q9Y4R7 772 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 HCFC2Q9Y5Z7 792 aa9.85□□□□□ -0.83
UBFD1-202ENST00000563366 TCRBV9S1A1TA0A576 114 aa9.84□□□□□ -0.83
UBFD1-202ENST00000563366 SMIM23A6NLE4 172 aa9.84□□□□□ -0.83
UBFD1-202ENST00000563366 SLC9A3R1O14745 358 aaPredicted RBP9.84□□□□□ -0.83
UBFD1-202ENST00000563366 KDELR3O43731 214 aa9.84□□□□□ -0.83
UBFD1-202ENST00000563366 TBL1XO60907 577 aa9.84□□□□□ -0.83
UBFD1-202ENST00000563366 AVILO75366 819 aa9.84□□□□□ -0.83
UBFD1-202ENST00000563366 LUC7L3O95232 432 aaKnown RBP9.84□□□□□ -0.83
UBFD1-202ENST00000563366 PAPLNO95428 1278 aa9.84□□□□□ -0.83
UBFD1-202ENST00000563366 PEX11BO96011 259 aa9.84□□□□□ -0.83
UBFD1-202ENST00000563366 HLA-DQB2P05538 268 aa9.84□□□□□ -0.83
UBFD1-202ENST00000563366 INHBAP08476 426 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms