RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 RTN2O75298 545 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 ENDOD1O94919 500 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 IL1BP01584 269 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 SULT1E1P49888 294 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 JAM2P57087 298 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 SFSWAPQ12872 951 aaKnown RBP10.34□□□□□ -0.75
SNX29-202ENST00000563308 KRT31Q15323 416 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 PRAMEF14Q5SWL7 426 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 FAM102AQ5T9C2 384 aaPredicted RBP10.34□□□□□ -0.75
SNX29-202ENST00000563308 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.34□□□□□ -0.75
SNX29-202ENST00000563308 Q6ZVU0 165 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 SND1Q7KZF4 910 aaKnown RBP eCLIP10.34□□□□□ -0.75
SNX29-202ENST00000563308 SH2D3CQ8N5H7 860 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 OR14C36Q8NHC7 312 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 CPA5Q8WXQ8 436 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 KDM4CQ9H3R0 1056 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 WDCPQ9H6R7 721 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 MPP6Q9NZW5 540 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 VPS51Q9UID3 782 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 VPS28Q9UK41 221 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 HS3ST2Q9Y278 367 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 SIK3Q9Y2K2 1263 aa10.34□□□□□ -0.75
SNX29-202ENST00000563308 A0A0D9SEW6 157 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 GOLGA8SH3BPF8 625 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 PES1O00541 588 aaKnown RBP10.33□□□□□ -0.76
SNX29-202ENST00000563308 ALOX15BO15296 676 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 SMAD6O43541 496 aaKnown RBP10.33□□□□□ -0.76
SNX29-202ENST00000563308 PLRG1O43660 514 aaKnown RBP10.33□□□□□ -0.76
SNX29-202ENST00000563308 ZNF821O75541 412 aaPredicted RBP10.33□□□□□ -0.76
SNX29-202ENST00000563308 F9P00740 461 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 CYP1A1P04798 512 aaPredicted RBP10.33□□□□□ -0.76
SNX29-202ENST00000563308 CTSLP07711 333 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 SRCP12931 536 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 MMP8P22894 467 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 NNMTP40261 264 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 TAS2R38P59533 333 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 FMO1Q01740 532 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 DEUP1Q05D60 604 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 CNTN1Q12860 1018 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 PTP4A2Q12974 167 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 AGBL4Q5VU57 503 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 C1QL3Q5VWW1 255 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 NAA35Q5VZE5 725 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 ARCQ7LC44 396 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 OR2A12Q8NGT7 310 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 SAP25Q8TEE9 199 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 CFAP57Q96MR6 1250 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 REPIN1Q9BWE0 567 aaKnown RBP10.33□□□□□ -0.76
SNX29-202ENST00000563308 VPS16Q9H269 839 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 PDCL3Q9H2J4 239 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 SEPT10Q9P0V9 454 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 STAP1Q9ULZ2 295 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 PHTF1Q9UMS5 762 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 PLXNA2O75051 1894 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 LRRK1Q38SD2 2015 aa10.33□□□□□ -0.76
SNX29-202ENST00000563308 MED13Q9UHV7 2174 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 NYNRINQ9P2P1 1898 aaKnown RBP10.32□□□□□ -0.76
SNX29-202ENST00000563308 SVILO95425 2214 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 TBC1D3DA0A087WVF3 549 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 TBC1D3IA0A087WXS9 549 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 TBC1D3EA0A087X179 549 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 TBC1D3KA0A087X1G2 549 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 TBC1D3FA6NER0 549 aaPredicted RBP10.32□□□□□ -0.76
SNX29-202ENST00000563308 TBC1D3LB9A6J9 549 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 SLC7A4O43246 635 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 ZMPSTE24O75844 475 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 GFPT2O94808 682 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 RHOCP08134 193 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 TBC1D3HP0C7X1 549 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 RRM1P23921 792 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 CD38P28907 300 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 CDR2Q01850 454 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 KCNAB2Q13303 367 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 POM121L1PQ3SYA9 428 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 ACCSLQ4AC99 568 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 PIP5KL1Q5T9C9 394 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 TBC1D3GQ6DHY5 549 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 TBC1D3CQ6IPX1 549 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 TFAP2DQ7Z6R9 452 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 SETD3Q86TU7 594 aaPredicted RBP10.32□□□□□ -0.76
SNX29-202ENST00000563308 HEATR4Q86WZ0 1026 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 FAM131BQ86XD5 332 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 ZNF677Q86XU0 584 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 SPATS2Q86XZ4 545 aaKnown RBP10.32□□□□□ -0.76
SNX29-202ENST00000563308 TBC1D3Q8IZP1 549 aaPredicted RBP10.32□□□□□ -0.76
SNX29-202ENST00000563308 EMC1Q8N766 993 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 EFCAB3Q8N7B9 438 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 OR7D4Q8NG98 312 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 OR8D1Q8WZ84 308 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 MIB2Q96AX9 1013 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 GRAMD1AQ96CP6 724 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 SERAC1Q96JX3 654 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 HAPLN3Q96S86 360 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 PPP1R9BQ96SB3 815 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 PCDHB18PQ96TA0 734 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 MAGEB5Q9BZ81 275 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 MUC3BQ9H195 1237 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 HSD3B7Q9H2F3 369 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 GDF3Q9NR23 364 aa10.32□□□□□ -0.76
SNX29-202ENST00000563308 FAM207AQ9NSI2 230 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms