RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 CD300CQ08708 224 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 EPS8Q12929 822 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 NFIXQ14938 502 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 TYSND1Q2T9J0 566 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 EPC2Q52LR7 807 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 CEP55Q53EZ4 464 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 YIF1BQ5BJH7 314 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 LIN9Q5TKA1 542 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 ZCCHC8Q6NZY4 707 aaKnown RBP7.35□□□□□ -1.23
CDH1-203ENST00000561751 TMEM26Q6ZUK4 368 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 ERMP1Q7Z2K6 904 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 HEATR3Q7Z4Q2 680 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 MAPKAPK5Q8IW41 473 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 ADGRF2Q8IZF7 708 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 ZNF786Q8N393 782 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 LINC00469Q8N7U9 141 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 FBXO36Q8NEA4 188 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 BHLHE22Q8NFJ8 381 aaPredicted RBP7.35□□□□□ -1.23
CDH1-203ENST00000561751 RASGRP4Q8TDF6 673 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 ATG4AQ8WYN0 398 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 NCLNQ969V3 563 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 FKBP10Q96AY3 582 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 CCDC124Q96CT7 223 aaKnown RBP7.35□□□□□ -1.23
CDH1-203ENST00000561751 HDAC11Q96DB2 347 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 ZNF578Q96N58 590 aaPredicted RBP7.35□□□□□ -1.23
CDH1-203ENST00000561751 PWWP2AQ96N64 755 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 CPXM1Q96SM3 734 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 PCDHB18PQ96TA0 734 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 GDF15Q99988 308 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 EBF4Q9BQW3 602 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 ADI1Q9BV57 179 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 RHOBTB2Q9BYZ6 727 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 TRIM15Q9C019 465 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 ZNF385DQ9H6B1 395 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 RIOX1Q9H6W3 641 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 HOMER2Q9NSB8 354 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 CCM2LQ9NUG4 571 aaPredicted RBP7.35□□□□□ -1.23
CDH1-203ENST00000561751 SEPT11Q9NVA2 429 aaKnown RBP7.35□□□□□ -1.23
CDH1-203ENST00000561751 ABI2Q9NYB9 513 aaPredicted RBP7.35□□□□□ -1.23
CDH1-203ENST00000561751 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.35□□□□□ -1.23
CDH1-203ENST00000561751 MTRRQ9UBK8 725 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 MID2Q9UJV3 735 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 STOML2Q9UJZ1 356 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 TLR6Q9Y2C9 796 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 TMA7Q9Y2S6 64 aaKnown RBP7.35□□□□□ -1.23
CDH1-203ENST00000561751 CAB39Q9Y376 341 aaPredicted RBP7.35□□□□□ -1.23
CDH1-203ENST00000561751 RBMX2Q9Y388 322 aaKnown RBP7.35□□□□□ -1.23
CDH1-203ENST00000561751 PCDHB12Q9Y5F1 795 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 PCDHGA3Q9Y5H0 932 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 HRH3Q9Y5N1 445 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 TEX264Q9Y6I9 313 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 ZNF831Q5JPB2 1677 aa7.35□□□□□ -1.23
CDH1-203ENST00000561751 C2orf71A6NGG8 1288 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 OR5K4A6NMS3 321 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 MEI4A8MW99 385 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 TRIM49D1C9J1S8 452 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 SLC9A3R1O14745 358 aaPredicted RBP7.34□□□□□ -1.23
CDH1-203ENST00000561751 CHADO15335 359 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 SULT1B1O43704 296 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 UPK1BO75841 260 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 CCNKO75909 580 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 SUPT7LO94864 414 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 RASAL1O95294 804 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 C1QAP02745 245 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 PGK2P07205 417 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 YES1P07947 543 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 UNGP13051 313 aaPredicted RBP7.34□□□□□ -1.23
CDH1-203ENST00000561751 XRCC1P18887 633 aaPredicted RBP7.34□□□□□ -1.23
CDH1-203ENST00000561751 ATICP31939 592 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 UGT2B10P36537 528 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 MAGEA6P43360 314 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 GNPDA1P46926 289 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 NOVP48745 357 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 ETV1P50549 477 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 DEFA1P59665 94 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 DEFA3P59666 94 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 EIF3EP60228 445 aaKnown RBP7.34□□□□□ -1.23
CDH1-203ENST00000561751 ABCE1P61221 599 aaKnown RBP7.34□□□□□ -1.23
CDH1-203ENST00000561751 MRPS5P82675 430 aaKnown RBP7.34□□□□□ -1.23
CDH1-203ENST00000561751 GALK2Q01415 458 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 FMO1Q01740 532 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 OTUD4Q01804 1114 aaKnown RBP7.34□□□□□ -1.23
CDH1-203ENST00000561751 ZNF45Q02386 682 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 TAP1Q03518 808 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 BFSP1Q12934 665 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 BNIP2Q12982 314 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 STX5Q13190 355 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 CEACAM7Q14002 265 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 NFE2L1Q14494 772 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 SQLEQ14534 574 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 FASTKD3Q14CZ7 662 aaKnown RBP7.34□□□□□ -1.23
CDH1-203ENST00000561751 ACOX1Q15067 660 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 TAF5Q15542 800 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 SMU1Q2TAY7 513 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 WDR44Q5JSH3 913 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.34□□□□□ -1.23
CDH1-203ENST00000561751 LMBRD2Q68DH5 695 aaPredicted RBP7.34□□□□□ -1.23
CDH1-203ENST00000561751 GJB7Q6PEY0 223 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 DBX2Q6ZNG2 339 aa7.34□□□□□ -1.23
CDH1-203ENST00000561751 CHSY3Q70JA7 882 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms