RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 KRIT1O00522 736 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 CDX4O14627 284 aaPredicted RBP14.11□□□□□ -0.15
TPM1-230ENST00000561266 PJA2O43164 708 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 PLRG1O43660 514 aaKnown RBP14.11□□□□□ -0.15
TPM1-230ENST00000561266 KRT7P08729 469 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 RHOAP61586 193 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 GBE1Q04446 702 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 IL10RBQ08334 325 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 ADCY2Q08462 1091 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 PAFAH1B3Q15102 231 aaKnown RBP14.11□□□□□ -0.15
TPM1-230ENST00000561266 PDK2Q15119 407 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 LLGL1Q15334 1064 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 TRIM61Q5EBN2 209 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 KIAA0895LQ68EN5 471 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 LAYNQ6UX15 382 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 PARS2Q7L3T8 475 aaKnown RBP14.11□□□□□ -0.15
TPM1-230ENST00000561266 DSG4Q86SJ6 1040 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 RYBPQ8N488 228 aaPredicted RBP14.11□□□□□ -0.15
TPM1-230ENST00000561266 ZCCHC9Q8N567 271 aaKnown RBP14.11□□□□□ -0.15
TPM1-230ENST00000561266 OR2T34Q8NGX1 318 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 SNX19Q92543 992 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 KRT35Q92764 455 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 FOXJ1Q92949 421 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 RNF25Q96BH1 459 aaPredicted RBP14.11□□□□□ -0.15
TPM1-230ENST00000561266 RMDN1Q96DB5 314 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 RNF157Q96PX1 679 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 MIR1-1HGQ9H1L0 117 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 CAPN10Q9HC96 672 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 RCOR3Q9P2K3 495 aaPredicted RBP14.11□□□□□ -0.15
TPM1-230ENST00000561266 GGT7Q9UJ14 662 aa14.11□□□□□ -0.15
TPM1-230ENST00000561266 ZFR2Q9UPR6 939 aaKnown RBP14.11□□□□□ -0.15
TPM1-230ENST00000561266 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.1□□□□□ -0.15
TPM1-230ENST00000561266 LRRD1A4D1F6 860 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 C1QTNF3-AMACRE9PGA6 284 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 PIGNO95427 931 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 PRNPP04156 253 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 UGT2B4P06133 528 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 ABL2P42684 1182 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 RECQLP46063 649 aaPredicted RBP14.1□□□□□ -0.15
TPM1-230ENST00000561266 VAV2P52735 878 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 GEMIN4P57678 1058 aaKnown RBP14.1□□□□□ -0.15
TPM1-230ENST00000561266 SNRPD1P62314 119 aaKnown RBP14.1□□□□□ -0.15
TPM1-230ENST00000561266 IHHQ14623 411 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 RSPO4Q2I0M5 234 aaPredicted RBP14.1□□□□□ -0.15
TPM1-230ENST00000561266 LRRC73Q5JTD7 316 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 FAM46CQ5VWP2 391 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 SLC23A3Q6PIS1 610 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 MFSD7Q6UXD7 560 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 NPNTQ6UXI9 565 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 B4GALNT4Q76KP1 1039 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 ERN2Q76MJ5 926 aaKnown RBP14.1□□□□□ -0.15
TPM1-230ENST00000561266 ZSWIM9Q86XI8 627 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 LZTR1Q8N653 840 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 PLD5Q8N7P1 536 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 KLK6Q92876 244 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 KLHL32Q96NJ5 620 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 ZNF670Q9BS34 389 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 HERPUD2Q9BSE4 406 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 SP110Q9HB58 689 aa14.1□□□□□ -0.15
TPM1-230ENST00000561266 FARP1Q9Y4F1 1045 aaPredicted RBP14.1□□□□□ -0.15
TPM1-230ENST00000561266 TBC1D3DA0A087WVF3 549 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 TBC1D3IA0A087WXS9 549 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 TBC1D3EA0A087X179 549 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 TBC1D3KA0A087X1G2 549 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 GRID2IPA4D2P6 1211 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 TBC1D3FA6NER0 549 aaPredicted RBP14.09□□□□□ -0.15
TPM1-230ENST00000561266 C16orf96A6NNT2 1141 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 TBC1D3LB9A6J9 549 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 KHNYNO15037 678 aaKnown RBP14.09□□□□□ -0.15
TPM1-230ENST00000561266 SPOPO43791 374 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 PALMO75781 387 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 POP4O95707 220 aaKnown RBP14.09□□□□□ -0.15
TPM1-230ENST00000561266 KRT1P04264 644 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 WNT1P04628 370 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 CFIP05156 583 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 TBC1D3HP0C7X1 549 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 ITGB7P26010 798 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 MAT2AP31153 395 aaKnown RBP14.09□□□□□ -0.15
TPM1-230ENST00000561266 SLC1A1P43005 524 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 GALNT2Q10471 571 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 FGL2Q14314 439 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 TAZQ16635 292 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 DUOXA1Q1HG43 343 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 AASDHQ4L235 1098 aaPredicted RBP14.09□□□□□ -0.15
TPM1-230ENST00000561266 LRRC38Q5VT99 294 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 TBC1D3GQ6DHY5 549 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 TBC1D3CQ6IPX1 549 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 RHOT1Q8IXI2 618 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 TBC1D3Q8IZP1 549 aaPredicted RBP14.09□□□□□ -0.15
TPM1-230ENST00000561266 GPR161Q8N6U8 529 aaKnown RBP14.09□□□□□ -0.15
TPM1-230ENST00000561266 LRRC57Q8N9N7 239 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 CASKIN2Q8WXE0 1202 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 CCDC114Q96M63 670 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 GDAP1L1Q96MZ0 367 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 HDAC8Q9BY41 377 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 PCED1AQ9H1Q7 454 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 CAAP1Q9H8G2 361 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 GRPEL1Q9HAV7 217 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 DTLQ9NZJ0 730 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 LCMT1Q9UIC8 334 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms