RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.42□□□□□ -1.22
GABPB1-211ENST00000561010 MPP6Q9NZW5 540 aa7.42□□□□□ -1.22
GABPB1-211ENST00000561010 ARHGAP20Q9P2F6 1191 aa7.42□□□□□ -1.22
GABPB1-211ENST00000561010 RWDD2AQ9UIY3 292 aa7.42□□□□□ -1.22
GABPB1-211ENST00000561010 VPS28Q9UK41 221 aa7.42□□□□□ -1.22
GABPB1-211ENST00000561010 DNAJC12Q9UKB3 198 aa7.42□□□□□ -1.22
GABPB1-211ENST00000561010 FZD4Q9ULV1 537 aa7.42□□□□□ -1.22
GABPB1-211ENST00000561010 SCML1Q9UN30 329 aa7.42□□□□□ -1.22
GABPB1-211ENST00000561010 OR51B4Q9Y5P0 310 aa7.42□□□□□ -1.22
GABPB1-211ENST00000561010 FHOD1Q9Y613 1164 aa7.42□□□□□ -1.22
GABPB1-211ENST00000561010 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.41□□□□□ -1.22
GABPB1-211ENST00000561010 GOLGA8SH3BPF8 625 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 TLR4O00206 839 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 SLC31A1O15431 190 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 HSF2BPO75031 334 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 GJB6O95452 261 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 RPLP1P05386 114 aaKnown RBP7.41□□□□□ -1.22
GABPB1-211ENST00000561010 SRCP12931 536 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 ZNF18P17022 549 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 ITPKBP27987 946 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 EPHA8P29322 1005 aaPredicted RBP7.41□□□□□ -1.22
GABPB1-211ENST00000561010 CCR1P32246 355 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 NNMTP40261 264 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 ACADVLP49748 655 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 SULT1E1P49888 294 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 PLK1P53350 603 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 CLDN2P57739 230 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 NXPH1P58417 271 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 CTBSQ01459 385 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 SLC6A3Q01959 620 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 ZNF177Q13360 481 aaPredicted RBP7.41□□□□□ -1.22
GABPB1-211ENST00000561010 RAPGEF1Q13905 1077 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 ELAVL3Q14576 367 aaKnown RBP7.41□□□□□ -1.22
GABPB1-211ENST00000561010 DPCR1Q3MIW9 517 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 SOWAHCQ53LP3 525 aaPredicted RBP7.41□□□□□ -1.22
GABPB1-211ENST00000561010 EFHC1Q5JVL4 640 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 MIIPQ5JXC2 388 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 RABGAP1LQ5R372 815 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 PIP5KL1Q5T9C9 394 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 NAPEPLDQ6IQ20 393 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 FOXR2Q6PJQ5 311 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 BEND5Q7L4P6 421 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 KANSL1Q7Z3B3 1105 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 ZNF683Q8IZ20 524 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 SH2D3CQ8N5H7 860 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 ZNF557Q8N988 423 aaPredicted RBP7.41□□□□□ -1.22
GABPB1-211ENST00000561010 KDM1BQ8NB78 822 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 GRIN3AQ8TCU5 1115 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 SAP25Q8TEE9 199 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 NOX5Q96PH1 765 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 SPAG5Q96R06 1193 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 NPY6RQ99463 290 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 TKTL2Q9H0I9 626 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 MUC3BQ9H195 1237 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 SYNCQ9H7C4 482 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 GDF3Q9NR23 364 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 UCKL1Q9NWZ5 548 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 SLC12A6Q9UHW9 1150 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 VPS51Q9UID3 782 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 SLC25A13Q9UJS0 675 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 ATMQ13315 3056 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 COL6A6A6NMZ7 2263 aa7.41□□□□□ -1.22
GABPB1-211ENST00000561010 HELZ2Q9BYK8 2649 aaKnown RBP7.41□□□□□ -1.22
GABPB1-211ENST00000561010 KPNA3O00505 521 aaPredicted RBP7.4□□□□□ -1.22
GABPB1-211ENST00000561010 PES1O00541 588 aaKnown RBP7.4□□□□□ -1.22
GABPB1-211ENST00000561010 TRIM38O00635 465 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 FFAR2O15552 330 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 LATO43561 262 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 PLRG1O43660 514 aaKnown RBP7.4□□□□□ -1.22
GABPB1-211ENST00000561010 TLX3O43711 291 aaPredicted RBP7.4□□□□□ -1.22
GABPB1-211ENST00000561010 FZD6O60353 706 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 RNGTTO60942 597 aaKnown RBP7.4□□□□□ -1.22
GABPB1-211ENST00000561010 RFPL3O75679 317 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 FGFR1OPO95684 399 aaKnown RBP7.4□□□□□ -1.22
GABPB1-211ENST00000561010 PDGFAP04085 211 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 RHOCP08134 193 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 GKP32189 559 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 KRT9P35527 623 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 FLT3P36888 993 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 MAP2K3P46734 347 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 KLK7P49862 253 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 SEMG2Q02383 582 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 DRAP1Q14919 205 aaPredicted RBP7.4□□□□□ -1.22
GABPB1-211ENST00000561010 SMAD1Q15797 465 aaKnown RBP7.4□□□□□ -1.22
GABPB1-211ENST00000561010 MEA1Q16626 185 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 TPD52L1Q16890 204 aaPredicted RBP7.4□□□□□ -1.22
GABPB1-211ENST00000561010 ZNF542PQ5EBM4 170 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 HES3Q5TGS1 186 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 TTC39BQ5VTQ0 682 aaPredicted RBP7.4□□□□□ -1.22
GABPB1-211ENST00000561010 SEL1L3Q68CR1 1132 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 LEKR1Q6ZMV7 388 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 ENOSF1Q7L5Y1 443 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 SLC26A9Q7LBE3 791 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 PRPF39Q86UA1 669 aaKnown RBP7.4□□□□□ -1.22
GABPB1-211ENST00000561010 XYLT1Q86Y38 959 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 GALNT15Q8N3T1 639 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 ATP11CQ8NB49 1132 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 NETO2Q8NC67 525 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 SLC20A1Q8WUM9 679 aa7.4□□□□□ -1.22
GABPB1-211ENST00000561010 CPA5Q8WXQ8 436 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms