RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 TCP11X1B4DZS4 312 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 CKMP06732 381 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 ITGA2BP08514 1039 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 ALADP13716 330 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 CR2P20023 1033 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 TAC1P20366 129 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 DDX6P26196 483 aaKnown RBP eCLIP13.07□□□□□ -0.32
SNX1-211ENST00000560829 FOXN2P32314 431 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 CHRNA4P43681 627 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 SERPINH1P50454 418 aaKnown RBP13.07□□□□□ -0.32
SNX1-211ENST00000560829 CSE1LP55060 971 aaKnown RBP13.07□□□□□ -0.32
SNX1-211ENST00000560829 HNRNPH2P55795 449 aaKnown RBP13.07□□□□□ -0.32
SNX1-211ENST00000560829 POU6F1Q14863 301 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 MROH9Q5TGP6 573 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 RNF43Q68DV7 783 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 LVRNQ6Q4G3 990 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 PIGWQ7Z7B1 504 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 SPATS2Q86XZ4 545 aaKnown RBP13.07□□□□□ -0.32
SNX1-211ENST00000560829 CNTN4Q8IWV2 1026 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 TMA16Q96EY4 203 aaKnown RBP13.07□□□□□ -0.32
SNX1-211ENST00000560829 FEM1CQ96JP0 617 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 TGS1Q96RS0 853 aaKnown RBP13.07□□□□□ -0.32
SNX1-211ENST00000560829 SEMA3CQ99985 751 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 CORO1BQ9BR76 489 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 SPON2Q9BUD6 331 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 FAM107BQ9H098 131 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 NSRP1Q9H0G5 558 aaKnown RBP13.07□□□□□ -0.32
SNX1-211ENST00000560829 TREX1Q9NSU2 369 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 C20orf96Q9NUD7 363 aaPredicted RBP13.07□□□□□ -0.32
SNX1-211ENST00000560829 NSMCE4AQ9NXX6 385 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 TXNDC16Q9P2K2 825 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 SLC17A6Q9P2U8 582 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 GRID1Q9ULK0 1009 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 ARHGAP26Q9UNA1 814 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 OR51B4Q9Y5P0 310 aa13.07□□□□□ -0.32
SNX1-211ENST00000560829 EBAG9O00559 213 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 NRG2O14511 850 aaPredicted RBP13.06□□□□□ -0.32
SNX1-211ENST00000560829 COPEO14579 308 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 CCL16O15467 120 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 TBL1XO60907 577 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 ARHGEF15O94989 841 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 LUC7L3O95232 432 aaKnown RBP13.06□□□□□ -0.32
SNX1-211ENST00000560829 PAPSS2O95340 614 aaPredicted RBP13.06□□□□□ -0.32
SNX1-211ENST00000560829 VIMP08670 466 aaKnown RBP13.06□□□□□ -0.32
SNX1-211ENST00000560829 ATXN1LP0C7T5 689 aaKnown RBP13.06□□□□□ -0.32
SNX1-211ENST00000560829 CES1P23141 567 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 ARCN1P48444 511 aaKnown RBP13.06□□□□□ -0.32
SNX1-211ENST00000560829 PCSK7Q16549 785 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 HSP90AA5PQ58FG0 334 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 MPP7Q5T2T1 576 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 GKAP1Q5VSY0 366 aaPredicted RBP13.06□□□□□ -0.32
SNX1-211ENST00000560829 HHATQ5VTY9 493 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 RNF219Q5W0B1 726 aaPredicted RBP13.06□□□□□ -0.32
SNX1-211ENST00000560829 KIAA0930Q6ICG6 404 aaPredicted RBP13.06□□□□□ -0.32
SNX1-211ENST00000560829 SRPK1Q96SB4 655 aaKnown RBP13.06□□□□□ -0.32
SNX1-211ENST00000560829 RBBP8Q99708 897 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 LBHD1Q9BQE6 289 aaPredicted RBP13.06□□□□□ -0.32
SNX1-211ENST00000560829 HTATIP2Q9BUP3 242 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 SLC46A2Q9BY10 475 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 VPS11Q9H270 941 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 IL1RAPL1Q9NZN1 696 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 PLXNA4Q9HCM2 1894 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 HEATR9A2RTY3 570 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 GRM6O15303 877 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 SIN3BO75182 1162 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 ZMPSTE24O75844 475 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 ALDOAP04075 364 aaKnown RBP13.06□□□□□ -0.32
SNX1-211ENST00000560829 SERPINF2P08697 491 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 POU2F2P09086 479 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 HNRNPA1P09651 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
SNX1-211ENST00000560829 MYL4P12829 197 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 HLA-DPA1P20036 260 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 GLDCP23378 1020 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 CRHR1P34998 444 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 SPRP35270 261 aaPredicted RBP13.06□□□□□ -0.32
SNX1-211ENST00000560829 CCR2P41597 374 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 MAGEA12P43365 314 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 LIMK2P53671 638 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 CDHR3Q6ZTQ4 885 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 LEMD2Q8NC56 503 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 SHKBP1Q8TBC3 707 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 SAMD11Q96NU1 681 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 CINPQ9BW66 212 aaPredicted RBP13.06□□□□□ -0.32
SNX1-211ENST00000560829 MUC3BQ9H195 1237 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 CFAP97Q9P2B7 532 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 SLC17A7Q9P2U7 560 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 DNMT3BQ9UBC3 853 aaKnown RBP13.06□□□□□ -0.32
SNX1-211ENST00000560829 PLLPQ9Y342 182 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 SH3BP1Q9Y3L3 701 aa13.06□□□□□ -0.32
SNX1-211ENST00000560829 H0Y626 953 aa13.05□□□□□ -0.32
SNX1-211ENST00000560829 LEFTY2O00292 366 aa13.05□□□□□ -0.32
SNX1-211ENST00000560829 MOSPD3O75425 235 aa13.05□□□□□ -0.32
SNX1-211ENST00000560829 CD160O95971 181 aa13.05□□□□□ -0.32
SNX1-211ENST00000560829 FGF1P05230 155 aa13.05□□□□□ -0.32
SNX1-211ENST00000560829 PTPN2P17706 415 aa13.05□□□□□ -0.32
SNX1-211ENST00000560829 PAMP19021 973 aa13.05□□□□□ -0.32
SNX1-211ENST00000560829 ARNTP27540 789 aa13.05□□□□□ -0.32
SNX1-211ENST00000560829 IRS1P35568 1242 aa13.05□□□□□ -0.32
SNX1-211ENST00000560829 ARF5P84085 180 aa13.05□□□□□ -0.32
SNX1-211ENST00000560829 CDK18Q07002 472 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms