RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 NSUN3Q9H649 340 aaKnown RBP7.55□□□□□ -1.2
IDH3A-220ENST00000560667 SFXN1Q9H9B4 322 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 TMBIM4Q9HC24 238 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 SPHK2Q9NRA0 654 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 SLC2A6Q9UGQ3 507 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 LSM7Q9UK45 103 aaKnown RBP7.55□□□□□ -1.2
IDH3A-220ENST00000560667 TRHDEQ9UKU6 1024 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 TCRBV9S1A1TA0A576 114 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 GOLGA8CPA6NN73 597 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 HEPACAM2A8MVW5 462 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 AURKAO14965 403 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 BNIP3LO60238 219 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 RNF40O75150 1001 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 STK10O94804 968 aaKnown RBP7.55□□□□□ -1.2
IDH3A-220ENST00000560667 NUDT17P0C025 328 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 NMBRP28336 390 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 FDFT1P37268 417 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 ABCG1P45844 678 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 CDH18Q13634 790 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 DHCR24Q15392 516 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 CTC1Q2NKJ3 1217 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 GAB4Q2WGN9 574 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 KRT71Q3SY84 523 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 KBTBD12Q3ZCT8 623 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 FUT11Q495W5 492 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 IER5LQ5T953 404 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 CASC4Q6P4E1 433 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 LRRC8BQ6P9F7 803 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 TMEM184AQ6ZMB5 413 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 SETD3Q86TU7 594 aaPredicted RBP7.55□□□□□ -1.2
IDH3A-220ENST00000560667 DNAAF3Q8N9W5 541 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 MCUQ8NE86 351 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 FIBINQ8TAL6 211 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 CYB5D2Q8WUJ1 264 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 EBNA1BP2Q99848 306 aaKnown RBP7.55□□□□□ -1.2
IDH3A-220ENST00000560667 KXD1Q9BQD3 176 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 C12orf65Q9H3J6 166 aaKnown RBP7.55□□□□□ -1.2
IDH3A-220ENST00000560667 POMKQ9H5K3 350 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 KIF9Q9HAQ2 790 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 CASS4Q9NQ75 786 aa7.55□□□□□ -1.2
IDH3A-220ENST00000560667 DUS2Q9NX74 493 aaKnown RBP7.55□□□□□ -1.2
IDH3A-220ENST00000560667 ZC3H7BQ9UGR2 993 aaKnown RBP7.55□□□□□ -1.2
IDH3A-220ENST00000560667 NOVA2Q9UNW9 492 aaKnown RBP7.55□□□□□ -1.2
IDH3A-220ENST00000560667 VPS13AQ96RL7 3174 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 A0A1W2PPM1 405 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 A8MX80 341 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 WASH3PC4AMC7 463 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 ZNF197O14709 1029 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 SUN1O94901 812 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 PENKP01210 267 aaPredicted RBP7.54□□□□□ -1.2
IDH3A-220ENST00000560667 PRLP01236 227 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 ERVK-10P10266 1014 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 IFFO1Q0D2I5 559 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 GALNT3Q14435 633 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 EML3Q32P44 896 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 MPPE1Q53F39 396 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 VITQ6UXI7 678 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 CHST9Q7L1S5 443 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 ADIPOR2Q86V24 386 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 CPXM2Q8N436 756 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 HJURPQ8NCD3 748 aaPredicted RBP7.54□□□□□ -1.2
IDH3A-220ENST00000560667 AGAP2Q99490 1192 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 GAS2L1Q99501 681 aaPredicted RBP7.54□□□□□ -1.2
IDH3A-220ENST00000560667 LMAN2LQ9H0V9 348 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 SLC25A51Q9H1U9 297 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 OGFRQ9NZT2 677 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 VPS18Q9P253 973 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 CHKBQ9Y259 395 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 PSAT1Q9Y617 370 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 WDR87Q6ZQQ6 2873 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 LAMA1P25391 3075 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 F5P12259 2224 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 SDR42E2A6NKP2 422 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 PRRT4C9JH25 899 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 TMCC1O94876 653 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 PAPLNO95428 1278 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 CYP17A1P05093 508 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 CISD3P0C7P0 127 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 CR2P20023 1033 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 SOX9P48436 509 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 ATP1A2P50993 1020 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 ZNF33AQ06730 810 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 MPP2Q14168 576 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 PLEKHG6Q3KR16 790 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 PITRM1Q5JRX3 1037 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 SIRPB2Q5JXA9 342 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 TIGD7Q6NT04 549 aaPredicted RBP7.54□□□□□ -1.2
IDH3A-220ENST00000560667 ESRP1Q6NXG1 681 aaKnown RBP7.54□□□□□ -1.2
IDH3A-220ENST00000560667 RTL10Q7L3V2 364 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 CAMK1DQ8IU85 385 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 CELF5Q8N6W0 485 aaKnown RBP7.54□□□□□ -1.2
IDH3A-220ENST00000560667 ACVR1CQ8NER5 493 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 MDM1Q8TC05 714 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 SMARCD2Q92925 531 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 NXPE3Q969Y0 559 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 TADA1Q96BN2 335 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 PSKH2Q96QS6 385 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 VAT1Q99536 393 aa7.54□□□□□ -1.2
IDH3A-220ENST00000560667 KLF6Q99612 283 aaPredicted RBP7.54□□□□□ -1.2
IDH3A-220ENST00000560667 FAM83CQ9BQN1 747 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms