RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 IARS2Q9NSE4 1012 aaKnown RBP11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 NKIRAS1Q9NYS0 192 aa11.03□□□□□ -0.64
SNRPA1-211ENST00000560433 TCP11X1B4DZS4 312 aa11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 K7ERQ8 282 aa11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 ALDH1A2O94788 518 aa11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 SP100P23497 879 aaPredicted RBP11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 ADRA1DP25100 572 aa11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 CSKP41240 450 aa11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 ARF5P84085 180 aa11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 LVRNQ6Q4G3 990 aa11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 APCDD1Q8J025 514 aa11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 TEX26Q8N6G2 289 aa11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 ZNF473Q8WTR7 871 aaKnown RBP11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 THOC1Q96FV9 657 aaKnown RBP11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 IL22Q9GZX6 179 aa11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 MAGEH1Q9H213 219 aa11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 PCMTD2Q9NV79 361 aa11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 DONSONQ9NYP3 566 aa11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 ASB3Q9Y575 518 aa11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 KCTD3Q9Y597 815 aa11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 MTCL1Q9Y4B5 1905 aaKnown RBP11.02□□□□□ -0.65
SNRPA1-211ENST00000560433 TRAV19A0A0A6YYK7 116 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CARNS1A5YM72 827 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 ANKRD65E5RJM6 399 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 RFXAPO00287 272 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 LPXNO60711 386 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CLASP2O75122 1294 aaKnown RBP11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 MOSPD3O75425 235 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 VAPBO95292 243 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 SNRPAP09012 282 aaKnown RBP11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 SAT1P21673 171 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 FOXN2P32314 431 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 GBP2P32456 591 aaPredicted RBP11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 AVPR1AP37288 418 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 MAGEA10P43363 369 aaPredicted RBP11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 IRX4P78413 519 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 TMPRSS15P98073 1019 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CBLBQ13191 982 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CDH18Q13634 790 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CNGA3Q16281 694 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 TMCO4Q5TGY1 634 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 PACS1Q6VY07 963 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 Q6ZNB5 142 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 LINC00523Q86TU6 105 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 KCNMB4Q86W47 210 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 TDRD5Q8NAT2 981 aaKnown RBP11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 ACVR1CQ8NER5 493 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 OR6K2Q8NGY2 324 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 SH3RF2Q8TEC5 729 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 MYLIPQ8WY64 445 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 TTC17Q96AE7 1141 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 GCNAQ96QF7 691 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 POLR1EQ9GZS1 481 aaKnown RBP11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CAB39LQ9H9S4 337 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 NOD2Q9HC29 1040 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 FETUBQ9UGM5 382 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 VPS28Q9UK41 221 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 FCF1Q9Y324 198 aaKnown RBP11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CHD5Q8TDI0 1954 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CCDC195A0A1B0GUA6 201 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 RFPL1O75677 317 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 USP1O94782 785 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 PRAMEF12O95522 483 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CD160O95971 181 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 SLC4A1P02730 911 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 NPY2RP49146 381 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 NR1H3Q13133 447 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CTBP1Q13363 440 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 MPP3Q13368 585 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 GPM6BQ13491 265 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 PPM1JQ5JR12 505 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 SIRPB2Q5JXA9 342 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 FAM47EQ6ZV65 393 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 SH2D5Q6ZV89 423 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 STRA8Q7Z7C7 330 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CPLX4Q7Z7G2 160 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CMC1Q7Z7K0 106 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 MFN1Q8IWA4 741 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 DENND6AQ8IWF6 608 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CMTM8Q8IZV2 173 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 BANPQ8N9N5 519 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 PDCD6IPQ8WUM4 868 aaKnown RBP11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CHMP6Q96FZ7 201 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 ZNF317Q96PQ6 595 aaPredicted RBP11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 FAM111AQ96PZ2 611 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CINPQ9BW66 212 aaPredicted RBP11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 MTIF3Q9H2K0 278 aaKnown RBP11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 LINC00597Q9H2U6 94 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 UBA2Q9UBT2 640 aaPredicted RBP11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 SOX13Q9UN79 622 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 LZTS1Q9Y250 596 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 CHKBQ9Y259 395 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 PCDHGC4Q9Y5F7 938 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 ACTL7BQ9Y614 415 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 FAM169AQ9Y6X4 670 aa11.01□□□□□ -0.65
SNRPA1-211ENST00000560433 FAM237BA0A1B0GVD1 139 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 KDELR3O43731 214 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 KRT37O76014 449 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 CDC25CP30307 473 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 HNRNPH2P55795 449 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms