RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 WDR59Q6PJI9 974 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 HORMAD1Q86X24 394 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 ERICH1Q86X53 443 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 XYLT1Q86Y38 959 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 RFFLQ8WZ73 363 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 BAP1Q92560 729 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 IFT43Q96FT9 208 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 KLHDC7BQ96G42 594 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 CHP1Q99653 195 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 HDAC8Q9BY41 377 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 NRSN2Q9GZP1 204 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 RETREG1Q9H6L5 497 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 NLRC4Q9NPP4 1024 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 IL36AQ9UHA7 158 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 FHOD1Q9Y613 1164 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 IGSF10Q6WRI0 2623 aa13.85□□□□□ -0.19
SMAD3-214ENST00000560402 A0A1W2PQU0 124 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 I6L893 689 aaPredicted RBP13.84□□□□□ -0.19
SMAD3-214ENST00000560402 SLU7O95391 586 aaKnown RBP13.84□□□□□ -0.19
SMAD3-214ENST00000560402 MT-CO1P00395 513 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 THEGLP0DJG4 465 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 FERP16591 822 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 TFE3P19532 575 aaPredicted RBP13.84□□□□□ -0.19
SMAD3-214ENST00000560402 RRM1P23921 792 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 ABCG1P45844 678 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 SERPINH1P50454 418 aaKnown RBP13.84□□□□□ -0.19
SMAD3-214ENST00000560402 NEK3P51956 506 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 RNASE9P60153 205 aaKnown RBP13.84□□□□□ -0.19
SMAD3-214ENST00000560402 KLHL30Q0D2K2 578 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
SMAD3-214ENST00000560402 RTP5Q14D33 572 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 PROX2Q3B8N5 592 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 CCDC122Q5T0U0 273 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 KLHDC7AQ5VTJ3 777 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 KIAA1161Q6NSJ0 714 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 ERN2Q76MJ5 926 aaKnown RBP13.84□□□□□ -0.19
SMAD3-214ENST00000560402 BNIPLQ7Z465 357 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 TFAP2DQ7Z6R9 452 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 ZNF677Q86XU0 584 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 MARCH9Q86YJ5 346 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 PCDH20Q8N6Y1 951 aaKnown RBP13.84□□□□□ -0.19
SMAD3-214ENST00000560402 ACRBPQ8NEB7 543 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 EPS8L1Q8TE68 723 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 HNRNPLLQ8WVV9 542 aaKnown RBP13.84□□□□□ -0.19
SMAD3-214ENST00000560402 ARRDC3Q96B67 414 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 ZYG11BQ9C0D3 744 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 GANQ9H2C0 597 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 ANLNQ9NQW6 1124 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 EVA1BQ9NVM1 165 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 KLHL11Q9NVR0 708 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 AIPL1Q9NZN9 384 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 PPARGC1AQ9UBK2 798 aaKnown RBP13.84□□□□□ -0.19
SMAD3-214ENST00000560402 LOC400499M0QZD8 3231 aa13.84□□□□□ -0.19
SMAD3-214ENST00000560402 A0A0D9SEW6 157 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 CTAGE9A4FU28 777 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 A6NNZ2 444 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 F8VZ95 297 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 URI1O94763 535 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-214ENST00000560402 GFPT2O94808 682 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 ALPPL2P10696 532 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 UCHL3P15374 230 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 ITGB7P26010 798 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 FLT3P36888 993 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 STAT1P42224 750 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 VAV2P52735 878 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 NOMO3P69849 1222 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 NRG1Q02297 640 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-214ENST00000560402 ZNF211Q13398 564 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-214ENST00000560402 ZNF284Q2VY69 593 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 TMEM259Q4ZIN3 620 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 DPY19L2P1Q6NXN4 242 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 DCP2Q8IU60 420 aaKnown RBP13.83□□□□□ -0.2
SMAD3-214ENST00000560402 MNS1Q8NEH6 495 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 OR4C6Q8NH72 309 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 ATP13A1Q9HD20 1204 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 MPP6Q9NZW5 540 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 ZNF212Q9UDV6 495 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 TMEM59LQ9UK28 342 aa13.83□□□□□ -0.2
SMAD3-214ENST00000560402 TDRD6O60522 2096 aaKnown RBP13.83□□□□□ -0.2
SMAD3-214ENST00000560402 FASNP49327 2511 aaKnown RBP13.82□□□□□ -0.2
SMAD3-214ENST00000560402 K7ERQ8 282 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 SLC31A1O15431 190 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 SMAD6O43541 496 aaKnown RBP13.82□□□□□ -0.2
SMAD3-214ENST00000560402 AP1G1O43747 822 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 PRLRP16471 622 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 EIF4A3P38919 411 aaKnown RBP13.82□□□□□ -0.2
SMAD3-214ENST00000560402 GEMIN4P57678 1058 aaKnown RBP13.82□□□□□ -0.2
SMAD3-214ENST00000560402 DAB2P98082 770 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 E2F1Q01094 437 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 TARDBPQ13148 414 aaKnown RBP eCLIP13.82□□□□□ -0.2
SMAD3-214ENST00000560402 ARL13BQ3SXY8 428 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 ZNF569Q5MCW4 686 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 KYAT3Q6YP21 454 aaKnown RBP13.82□□□□□ -0.2
SMAD3-214ENST00000560402 GCNT7Q6ZNI0 430 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 DPY19L3Q6ZPD9 716 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 ABI3BPQ7Z7G0 1075 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 FAM131BQ86XD5 332 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 PLPP6Q8IY26 295 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 CHST14Q8NCH0 376 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 OR13H1Q8NG92 308 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms