RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 TRIM69Q86WT6 500 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 PLPP6Q8IY26 295 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 NIPA2Q8N8Q9 360 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 OR2AP1Q8NGE2 309 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 HSPH1Q92598 858 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 EXOC2Q96KP1 924 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 MYOCQ99972 504 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 PDFQ9HBH1 243 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 PREBQ9HCU5 417 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 DYRK4Q9NR20 520 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 ETNK2Q9NVF9 386 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 LHX3Q9UBR4 397 aa11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 ZFR2Q9UPR6 939 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 MAP1BP46821 2468 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-216ENST00000560243 ZSCAN5CA6NGD5 496 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 EIF3CLB5ME19 914 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 SLC31A1O15431 190 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 INSIG1O15503 277 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 SPINT1O43278 529 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 DAPK3O43293 454 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 PRAMEF11O60813 436 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 CER1O95813 267 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 TOP3BO95985 862 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 GSRP00390 522 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 UGT2B4P06133 528 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 ADRB3P13945 408 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 AMPD1P23109 780 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 ITGB7P26010 798 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 CD38P28907 300 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 ABL2P42684 1182 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 RHOAP61586 193 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 SNRPD1P62314 119 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 IL9RQ01113 521 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 SLC25A11Q02978 314 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 TBX2Q13207 712 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 SLC14A1Q13336 389 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 TRIM14Q14142 442 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 PIGHQ14442 188 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 ACAP1Q15027 740 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 DPYSL2Q16555 572 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 SLC18A3Q16572 532 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 ZNF284Q2VY69 593 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 SEL1L3Q68CR1 1132 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 NAPEPLDQ6IQ20 393 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 IL27RAQ6UWB1 636 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 PRPF39Q86UA1 669 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 PSTKQ8IV42 348 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 NAXDQ8IW45 347 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 EIF3CQ99613 913 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 FZD3Q9NPG1 666 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 TM7SF3Q9NS93 570 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 ABHD10Q9NUJ1 306 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 SPTLC3Q9NUV7 552 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 IP6K2Q9UHH9 426 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 GGT7Q9UJ14 662 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 ITM2BQ9Y287 266 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 BTBD3Q9Y2F9 522 aa11.83□□□□□ -0.52
RABGGTA-216ENST00000560243 IGF2RP11717 2491 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 C16orf96A6NNT2 1141 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 H3BRJ5 948 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 DFFAO00273 331 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 PCDH8O95206 1070 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 POP4O95707 220 aaKnown RBP11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 CD48P09326 243 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 ITIH2P19823 946 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 PMLP29590 882 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 RGRP47804 291 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 HCAR3P49019 387 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 NEK3P51956 506 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 C21orf59P57076 290 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 SIM1P81133 766 aaPredicted RBP11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 FGL2Q14314 439 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 SHBQ15464 509 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 ZNF423Q2M1K9 1284 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 ATP13A4Q4VNC1 1196 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 TMEM259Q4ZIN3 620 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 BOLA3Q53S33 107 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 INO80DQ53TQ3 878 aaPredicted RBP11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 ZNF805Q5CZA5 627 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 LRRC73Q5JTD7 316 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 FBXL19Q6PCT2 694 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 POLNQ7Z5Q5 900 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 HORMAD1Q86X24 394 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 SPATS2Q86XZ4 545 aaKnown RBP11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 ZNF564Q8TBZ8 553 aaPredicted RBP11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 TSC1Q92574 1164 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 PPP1R16AQ96I34 528 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 GDAP1L1Q96MZ0 367 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 KLHL32Q96NJ5 620 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 CSPG4P5Q96PW8 444 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 NCAPGQ9BPX3 1015 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 RBSNQ9H1K0 784 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 SLC32A1Q9H598 525 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 CAAP1Q9H8G2 361 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 PCDH18Q9HCL0 1135 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 CTTNBP2NLQ9P2B4 639 aa11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 UBA2Q9UBT2 640 aaPredicted RBP11.82□□□□□ -0.52
RABGGTA-216ENST00000560243 FADS3Q9Y5Q0 445 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms