RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 KRT10P13645 584 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 MX2P20592 715 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 PTGER3P43115 390 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 RGRP47804 291 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 ADCY2Q08462 1091 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 SLC10A7Q0GE19 358 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 LBRQ14739 615 aaKnown RBP17.08■□□□□ 0.32
RPL28-209ENST00000560055 AGBL4Q5VU57 503 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 RFX6Q8HWS3 928 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 SLC41A1Q8IVJ1 513 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 HDDC3Q8N4P3 179 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 CADM4Q8NFZ8 388 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 OR6K2Q8NGY2 324 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.08■□□□□ 0.32
RPL28-209ENST00000560055 RUBCNQ92622 972 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 ARRDC3Q96B67 414 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 HDAC11Q96DB2 347 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 EXOC2Q96KP1 924 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 OLFM3Q96PB7 478 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 OMDQ99983 421 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 GPR174Q9BXC1 333 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 PCED1AQ9H1Q7 454 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 SEPT3Q9UH03 358 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 AMFRQ9UKV5 643 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 NCKAP1Q9Y2A7 1128 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 PPP2R2CQ9Y2T4 447 aa17.08■□□□□ 0.32
RPL28-209ENST00000560055 MIF4GDA9UHW6 222 aaKnown RBP17.07■□□□□ 0.32
RPL28-209ENST00000560055 KPNA3O00505 521 aaPredicted RBP17.07■□□□□ 0.32
RPL28-209ENST00000560055 INSIG1O15503 277 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 SLC7A4O43246 635 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 NDUFS2O75306 463 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 SEMA4FO95754 770 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 FTCDO95954 541 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 ITGB7P26010 798 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 GKP32189 559 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 PTPN7P35236 360 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 CSNK1DP48730 415 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 ADPRHP54922 357 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 RWDD2BP57060 319 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 COPS2P61201 443 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 NSUN2Q08J23 767 aaKnown RBP eCLIP17.07■□□□□ 0.32
RPL28-209ENST00000560055 CNTN1Q12860 1018 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 TFDP2Q14188 446 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 POM121L1PQ3SYA9 428 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 PIP5KL1Q5T9C9 394 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 MAML1Q92585 1016 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 HES6Q96HZ4 224 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 HDAC8Q9BY41 377 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 ZDHHC6Q9H6R6 413 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 EVLQ9UI08 416 aaPredicted RBP17.07■□□□□ 0.32
RPL28-209ENST00000560055 GMEB2Q9UKD1 530 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 EFR3BQ9Y2G0 817 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 PCDHGA5Q9Y5G8 931 aa17.07■□□□□ 0.32
RPL28-209ENST00000560055 BCLAF3A2AJT9 711 aaKnown RBP17.06■□□□□ 0.32
RPL28-209ENST00000560055 PLK4O00444 970 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 KRIT1O00522 736 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 DDX3YO15523 660 aaKnown RBP17.06■□□□□ 0.32
RPL28-209ENST00000560055 CST8O60676 142 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 CR2P20023 1033 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 CCNCP24863 283 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 NR2C2P49116 596 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 ZNF33AQ06730 810 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 PPIDQ08752 370 aaKnown RBP17.06■□□□□ 0.32
RPL28-209ENST00000560055 HNRNPDQ14103 355 aaKnown RBP17.06■□□□□ 0.32
RPL28-209ENST00000560055 PEAR1Q5VY43 1037 aaPredicted RBP17.06■□□□□ 0.32
RPL28-209ENST00000560055 TIGD7Q6NT04 549 aaPredicted RBP17.06■□□□□ 0.32
RPL28-209ENST00000560055 NPNTQ6UXI9 565 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 RYBPQ8N488 228 aaPredicted RBP17.06■□□□□ 0.32
RPL28-209ENST00000560055 DEFB119Q8N690 84 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 TEX26Q8N6G2 289 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 GANCQ8TET4 914 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 UBE2Q2Q8WVN8 375 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 FOXJ1Q92949 421 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 HSPA12BQ96MM6 686 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 MGME1Q9BQP7 344 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 HERPUD2Q9BSE4 406 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 CINPQ9BW66 212 aaPredicted RBP17.06■□□□□ 0.32
RPL28-209ENST00000560055 OSBPL1AQ9BXW6 950 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 CPEB1Q9BZB8 566 aaKnown RBP17.06■□□□□ 0.32
RPL28-209ENST00000560055 C6orf106Q9H6K1 298 aaPredicted RBP17.06■□□□□ 0.32
RPL28-209ENST00000560055 LZTFL1Q9NQ48 299 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 PACSIN2Q9UNF0 486 aaPredicted RBP17.06■□□□□ 0.32
RPL28-209ENST00000560055 HEY1Q9Y5J3 304 aa17.06■□□□□ 0.32
RPL28-209ENST00000560055 TNRC6BQ9UPQ9 1833 aaKnown RBP17.05■□□□□ 0.32
RPL28-209ENST00000560055 METTL12A8MUP2 240 aa17.05■□□□□ 0.32
RPL28-209ENST00000560055 MATN3O15232 486 aa17.05■□□□□ 0.32
RPL28-209ENST00000560055 PLRG1O43660 514 aaKnown RBP17.05■□□□□ 0.32
RPL28-209ENST00000560055 PYGMP11217 842 aa17.05■□□□□ 0.32
RPL28-209ENST00000560055 TGM2P21980 687 aa17.05■□□□□ 0.32
RPL28-209ENST00000560055 TGM1P22735 817 aa17.05■□□□□ 0.32
RPL28-209ENST00000560055 HSPA9P38646 679 aaKnown RBP17.05■□□□□ 0.32
RPL28-209ENST00000560055 ID4P47928 161 aa17.05■□□□□ 0.32
RPL28-209ENST00000560055 DHPSP49366 369 aaPredicted RBP17.05■□□□□ 0.32
RPL28-209ENST00000560055 TAS2R38P59533 333 aa17.05■□□□□ 0.32
RPL28-209ENST00000560055 DYNLT1P63172 113 aa17.05■□□□□ 0.32
RPL28-209ENST00000560055 RAD51Q06609 339 aa17.05■□□□□ 0.32
RPL28-209ENST00000560055 PDK1Q15118 436 aa17.05■□□□□ 0.32
RPL28-209ENST00000560055 LLGL1Q15334 1064 aa17.05■□□□□ 0.32
RPL28-209ENST00000560055 ZNF805Q5CZA5 627 aa17.05■□□□□ 0.32
RPL28-209ENST00000560055 PLA2G2CQ5R387 149 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms