RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 TIAF1O95411 115 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 SLC2A3P11169 496 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 LAMP2P13473 410 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 DRD2P14416 443 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 CD70P32970 193 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 PTPN7P35236 360 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 CSKP41240 450 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 MTHFRP42898 656 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 SLC6A11P48066 632 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 VPS41P49754 854 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 PAPOLAP51003 745 aaKnown RBP5.34□□□□□ -1.55
SPG11-220ENST00000559933 KPNA1P52294 538 aaPredicted RBP5.34□□□□□ -1.55
SPG11-220ENST00000559933 MLLT6P55198 1093 aaPredicted RBP5.34□□□□□ -1.55
SPG11-220ENST00000559933 SLC7A5Q01650 507 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 KDSRQ06136 332 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 HTR4Q13639 388 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 PDK2Q15119 407 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 NOMO1Q15155 1222 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 WHAMMP3Q1A5X7 153 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 AAK1Q2M2I8 961 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 GAB4Q2WGN9 574 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 ANO4Q32M45 955 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 TEX35Q5T0J7 233 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 SYCP2LQ5T4T6 812 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 ADGRF1Q5T601 910 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 FYB2Q5VWT5 728 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 CXorf57Q6NSI4 855 aaKnown RBP5.34□□□□□ -1.55
SPG11-220ENST00000559933 RHBDF2Q6PJF5 856 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 TMCO3Q6UWJ1 677 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 LINGO4Q6UY18 593 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 HTR3DQ70Z44 454 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 UNC45BQ8IWX7 931 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 FAM217AQ8IXS0 508 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 APCDD1Q8J025 514 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 FBXL6Q8N531 539 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 ZNF276Q8N554 614 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.34□□□□□ -1.55
SPG11-220ENST00000559933 CELF5Q8N6W0 485 aaKnown RBP5.34□□□□□ -1.55
SPG11-220ENST00000559933 RTL3Q8N8U3 475 aaKnown RBP5.34□□□□□ -1.55
SPG11-220ENST00000559933 SPATA4Q8NEY3 305 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 BPIFB1Q8TDL5 484 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.34□□□□□ -1.55
SPG11-220ENST00000559933 DDI1Q8WTU0 396 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 CCDC74AQ96AQ1 378 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 HMCESQ96FZ2 354 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 CCDC114Q96M63 670 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 LGMNQ99538 433 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 TMEM121Q9BTD3 319 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 OSBPL1AQ9BXW6 950 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 MAK16Q9BXY0 300 aaKnown RBP5.34□□□□□ -1.55
SPG11-220ENST00000559933 ZYG11BQ9C0D3 744 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 SLC39A8Q9C0K1 460 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 ZDHHC4Q9NPG8 344 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 DUS2Q9NX74 493 aaKnown RBP5.34□□□□□ -1.55
SPG11-220ENST00000559933 GTSE1Q9NYZ3 720 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 SEPT10Q9P0V9 454 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 STOML2Q9UJZ1 356 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 LSM7Q9UK45 103 aaKnown RBP5.34□□□□□ -1.55
SPG11-220ENST00000559933 DNPEPQ9ULA0 475 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 SHROOM3Q8TF72 1996 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 MIA3Q5JRA6 1907 aa5.34□□□□□ -1.55
SPG11-220ENST00000559933 KIAA1549LQ6ZVL6 1849 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 ESYT3A0FGR9 886 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 DRGXA6NNA5 263 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 RASA4BC9J798 803 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 H7C0C1 242 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 J3KR12 359 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 APOC4-APOC2K7ER74 178 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 KCNK1O00180 336 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 CES2O00748 559 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 EIF1AYO14602 144 aaKnown RBP5.33□□□□□ -1.56
SPG11-220ENST00000559933 TTI1O43156 1089 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 RASA4O43374 803 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 RAD51CO43502 376 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 PHF2O75151 1096 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 TJP3O95049 919 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 LUC7L3O95232 432 aaKnown RBP5.33□□□□□ -1.56
SPG11-220ENST00000559933 B3GALT4O96024 378 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 PENKP01210 267 aaPredicted RBP5.33□□□□□ -1.56
SPG11-220ENST00000559933 APOC2P02655 101 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 RHOCP08134 193 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 RHOXF2BP0C7M4 288 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 ADH5P11766 374 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 TYRP14679 529 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 PRLRP16471 622 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 RBL1P28749 1068 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 OR1E1P30953 314 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 GDI1P31150 447 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 ETFBP38117 255 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 ATP5OP48047 213 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 IFNAR2P48551 515 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 AIF1P55008 147 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 EIF3EP60228 445 aaKnown RBP5.33□□□□□ -1.56
SPG11-220ENST00000559933 CKAP4Q07065 602 aaKnown RBP5.33□□□□□ -1.56
SPG11-220ENST00000559933 LMAN2Q12907 356 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 ZBTB17Q13105 803 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 MTM1Q13496 603 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 DHCR24Q15392 516 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 TRADDQ15628 312 aa5.33□□□□□ -1.56
SPG11-220ENST00000559933 ZNF423Q2M1K9 1284 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms