RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 XAB2Q9HCS7 855 aaKnown RBP12.36□□□□□ -0.43
HERC1-205ENST00000559886 LHX3Q9UBR4 397 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 SMAD6O43541 496 aaKnown RBP12.36□□□□□ -0.43
HERC1-205ENST00000559886 POLR2EP19388 210 aaKnown RBP12.36□□□□□ -0.43
HERC1-205ENST00000559886 CES1P23141 567 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 CD86P42081 329 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 RGRP47804 291 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 SKOR1P84550 965 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 SPARCL1Q14515 664 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 LRRC8BQ6P9F7 803 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 KDELC1Q6UW63 502 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 RPL10LQ96L21 214 aaKnown RBP12.36□□□□□ -0.43
HERC1-205ENST00000559886 BRD9Q9H8M2 597 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 ZNF446Q9NWS9 450 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 SLC25A13Q9UJS0 675 aa12.36□□□□□ -0.43
HERC1-205ENST00000559886 FCF1Q9Y324 198 aaKnown RBP12.36□□□□□ -0.43
HERC1-205ENST00000559886 TTC24A2A3L6 582 aaPredicted RBP12.35□□□□□ -0.43
HERC1-205ENST00000559886 ALOX15BO15296 676 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 AVILO75366 819 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 GJB3O75712 270 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 SRCP12931 536 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 ADRA1AP35348 466 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 OPRD1P41143 372 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 EIF2DP41214 584 aaKnown RBP12.35□□□□□ -0.43
HERC1-205ENST00000559886 STK19P49842 368 aaPredicted RBP12.35□□□□□ -0.43
HERC1-205ENST00000559886 PMS2P54278 862 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 RHOAP61586 193 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 MESP2Q0VG99 397 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 PDIA2Q13087 525 aaKnown RBP12.35□□□□□ -0.43
HERC1-205ENST00000559886 SLC14A2Q15849 920 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 AAK1Q2M2I8 961 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 GRAMD4Q6IC98 578 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 NAPEPLDQ6IQ20 393 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 PHTF2Q8N3S3 785 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 SH2D3CQ8N5H7 860 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 ATP11CQ8NB49 1132 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 TTC8Q8TAM2 541 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 NXPE3Q969Y0 559 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 CHFRQ96EP1 664 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 EXOC2Q96KP1 924 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 MRGPRX2Q96LB1 330 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 NUDCD1Q96RS6 583 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 SAYSD1Q9NPB0 183 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 USP12O75317 370 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 PMPCBO75439 489 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 ZNF821O75541 412 aaPredicted RBP12.35□□□□□ -0.43
HERC1-205ENST00000559886 COL4A2P08572 1712 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 MAGEA4P43358 317 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
HERC1-205ENST00000559886 SCNN1BP51168 640 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 WNT3AP56704 352 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 OLIG2Q13516 323 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 SPDYCQ5MJ68 293 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 LINC00523Q86TU6 105 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 IPMKQ8NFU5 416 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 ISG20Q96AZ6 181 aaKnown RBP12.35□□□□□ -0.43
HERC1-205ENST00000559886 FUT8Q9BYC5 575 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 SEMA4AQ9H3S1 761 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 KCNK12Q9HB15 430 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 NOD2Q9HC29 1040 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 CASS4Q9NQ75 786 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 LIMD1Q9UGP4 676 aa12.35□□□□□ -0.43
HERC1-205ENST00000559886 INSIG1O15503 277 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 BANF1O75531 89 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 ASLP04424 464 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 SERPINF2P08697 491 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 MTM1Q13496 603 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 CASP8Q14790 479 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 FASTKD3Q14CZ7 662 aaKnown RBP12.34□□□□□ -0.43
HERC1-205ENST00000559886 UAP1Q16222 522 aaPredicted RBP12.34□□□□□ -0.43
HERC1-205ENST00000559886 RALGPS1Q5JS13 557 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 DGKKQ5KSL6 1271 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 RANBP10Q6VN20 620 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 TRMT10CQ7L0Y3 403 aaKnown RBP12.34□□□□□ -0.43
HERC1-205ENST00000559886 HDXQ7Z353 690 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 NSMCE3Q96MG7 304 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 TBL1YQ9BQ87 522 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 CEP44Q9C0F1 390 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 PABPC3Q9H361 631 aaKnown RBP12.34□□□□□ -0.43
HERC1-205ENST00000559886 CDC42EP4Q9H3Q1 356 aaKnown RBP12.34□□□□□ -0.43
HERC1-205ENST00000559886 SCUBE2Q9NQ36 999 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 ERVW-1Q9UQF0 538 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.34□□□□□ -0.43
HERC1-205ENST00000559886 TIMM44O43615 452 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 AGTP01019 485 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 ATP5BP06576 529 aaKnown RBP12.34□□□□□ -0.43
HERC1-205ENST00000559886 DLDP09622 509 aaKnown RBP12.34□□□□□ -0.43
HERC1-205ENST00000559886 HSD17B3P37058 310 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 CSNK1DP48730 415 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 BBS9Q3SYG4 887 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 DNAJC21Q5F1R6 531 aaKnown RBP12.34□□□□□ -0.43
HERC1-205ENST00000559886 PTCRAQ6ISU1 281 aaPredicted RBP12.34□□□□□ -0.43
HERC1-205ENST00000559886 ZBED8Q8IZ13 594 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 AGGF1Q8N302 714 aaeCLIP12.34□□□□□ -0.43
HERC1-205ENST00000559886 TERB1Q8NA31 727 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 OR52K1Q8NGK4 314 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 LRRC39Q96DD0 335 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 MRGPRX3Q96LB0 322 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 SIGLEC10Q96LC7 697 aa12.34□□□□□ -0.43
HERC1-205ENST00000559886 WDR83Q9BRX9 315 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms