RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TBC1D3LB9A6J9 549 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 E9PAM4 449 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 F5H5T6 163 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 K7ERQ8 282 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 BIN1O00499 593 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 MCF2LO15068 1137 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 RNASEH1O60930 286 aaKnown RBP5.95□□□□□ -1.46
USP3-215ENST00000559771 GADD45BO75293 160 aaPredicted RBP5.95□□□□□ -1.46
USP3-215ENST00000559771 ZNF821O75541 412 aaPredicted RBP5.95□□□□□ -1.46
USP3-215ENST00000559771 RFPL3O75679 317 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 GRAP2O75791 330 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 CNTN5O94779 1100 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 LDOC1O95751 146 aaPredicted RBP5.95□□□□□ -1.46
USP3-215ENST00000559771 APOEP02649 317 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 AFPP02771 609 aaKnown RBP5.95□□□□□ -1.46
USP3-215ENST00000559771 PRB1P04280 392 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 ERBB2P04626 1255 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 ITGAVP06756 1048 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 TBC1D3HP0C7X1 549 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 KRT5P13647 590 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 SLC9A1P19634 815 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 ABCB4P21439 1286 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 GNA15P30679 374 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 MAT2AP31153 395 aaKnown RBP5.95□□□□□ -1.46
USP3-215ENST00000559771 EIF2S3P41091 472 aaKnown RBP5.95□□□□□ -1.46
USP3-215ENST00000559771 ACADSBP45954 432 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 SLC12A1Q13621 1099 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 AUHQ13825 339 aaKnown RBP5.95□□□□□ -1.46
USP3-215ENST00000559771 RTP5Q14D33 572 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 POM121L1PQ3SYA9 428 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 ALFQ53S48 1182 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 CCDC183Q5T5S1 534 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 PIP5KL1Q5T9C9 394 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 HES3Q5TGS1 186 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 TBC1D3GQ6DHY5 549 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 TBC1D3CQ6IPX1 549 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 NAPEPLDQ6IQ20 393 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 KLHL10Q6JEL2 608 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 TRIM65Q6PJ69 517 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 PCSK4Q6UW60 755 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 OLFML1Q6UWY5 402 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 FAM183BPQ6ZVS7 135 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 TRIM69Q86WT6 500 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 GAS2L3Q86XJ1 694 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 TBC1D3Q8IZP1 549 aaPredicted RBP5.95□□□□□ -1.46
USP3-215ENST00000559771 SH2D3CQ8N5H7 860 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 MFSD2AQ8NA29 543 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 TMEM145Q8NBT3 493 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 RFFLQ8WZ73 363 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 SHC3Q92529 594 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 SPAG5Q96R06 1193 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 UBL7Q96S82 380 aaPredicted RBP5.95□□□□□ -1.46
USP3-215ENST00000559771 CRACR2AQ9BSW2 395 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 SRRTQ9BXP5 876 aaKnown RBP5.95□□□□□ -1.46
USP3-215ENST00000559771 THAP9Q9H5L6 903 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 PRORYQ9H606 182 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 SIX2Q9NPC8 291 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 UBE2TQ9NPD8 197 aaPredicted RBP5.95□□□□□ -1.46
USP3-215ENST00000559771 GDF3Q9NR23 364 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 AASDHPPTQ9NRN7 309 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 PIGVQ9NUD9 493 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.95□□□□□ -1.46
USP3-215ENST00000559771 UCKL1Q9NWZ5 548 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 ZNF212Q9UDV6 495 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 TBC1D30Q9Y2I9 924 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 SNX10Q9Y5X0 201 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 HS3ST4Q9Y661 456 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 U3KQA8 63 aa5.95□□□□□ -1.46
USP3-215ENST00000559771 SETXQ7Z333 2677 aaKnown RBP5.95□□□□□ -1.46
USP3-215ENST00000559771 SYNJ2BP-COX16A0A087WUM0 186 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 TYW5A2RUC4 315 aaKnown RBP5.94□□□□□ -1.46
USP3-215ENST00000559771 POM121CA8CG34 1229 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 B8ZZF3 427 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 CDK2AP1O14519 115 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 CAPN9O14815 690 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 YKT6O15498 198 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 SLC7A4O43246 635 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 SART1O43290 800 aaKnown RBP5.94□□□□□ -1.46
USP3-215ENST00000559771 THAP12O43422 761 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 SMAD6O43541 496 aaKnown RBP5.94□□□□□ -1.46
USP3-215ENST00000559771 SNAP91O60641 907 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 SDC3O75056 442 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 PAGE1O75459 146 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 MOCS3O95396 460 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 ADCY5O95622 1261 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 CD160O95971 181 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 GLI1P08151 1106 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 C1SP09871 688 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 PNMA6AP0CW24 399 aaPredicted RBP5.94□□□□□ -1.46
USP3-215ENST00000559771 SRCP12931 536 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 MYF5P13349 255 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 JUPP14923 745 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 CKMT2P17540 419 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 GLDCP23378 1020 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 ACP1P24666 158 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 PON1P27169 355 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 CCR1P32246 355 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 CXCR3P49682 368 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 SULT2A1Q06520 285 aa5.94□□□□□ -1.46
USP3-215ENST00000559771 FGL2Q14314 439 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms