RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 LOC100653049A0A140TA62 436 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 CAPN14A8MX76 684 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 TRAFD1O14545 582 aaPredicted RBP10.75□□□□□ -0.69
CUX1-217ENST00000558836 TIMM44O43615 452 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 TLR5O60602 858 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 KRT34O76011 436 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 SLC35E2BP0CK96 405 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 NCF2P19878 526 aaPredicted RBP10.75□□□□□ -0.69
CUX1-217ENST00000558836 PDPK2PQ6A1A2 396 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 CNSTQ6PJW8 725 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 PGBD5Q8N414 524 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 RBM15BQ8NDT2 890 aaKnown RBP10.75□□□□□ -0.69
CUX1-217ENST00000558836 NXNL1Q96CM4 212 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 SUDS3Q9H7L9 328 aaPredicted RBP10.75□□□□□ -0.69
CUX1-217ENST00000558836 PRDM5Q9NQX1 630 aaPredicted RBP10.75□□□□□ -0.69
CUX1-217ENST00000558836 TCAF1Q9Y4C2 921 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 FRMPD3Q5JV73 1810 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 TMEM189-UBE2V1I3L0A0 370 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 NEMP1O14524 444 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 SYN3O14994 580 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 PEX11AO75192 247 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 ZMPSTE24O75844 475 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 HSPA4LO95757 839 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 GALTP07902 379 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 SBK3P0C264 359 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 EZRP15311 586 aaKnown RBP10.75□□□□□ -0.69
CUX1-217ENST00000558836 ATF6P18850 670 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 MAGEA12P43365 314 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 GEMP55040 296 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 MXRA7P84157 204 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 THOC5Q13769 683 aaKnown RBP10.75□□□□□ -0.69
CUX1-217ENST00000558836 KPNB1Q14974 876 aaKnown RBP10.75□□□□□ -0.69
CUX1-217ENST00000558836 POLD3Q15054 466 aaPredicted RBP10.75□□□□□ -0.69
CUX1-217ENST00000558836 ANO4Q32M45 955 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 RBM20Q5T481 1227 aaKnown RBP10.75□□□□□ -0.69
CUX1-217ENST00000558836 AFMIDQ63HM1 303 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 TIGD7Q6NT04 549 aaPredicted RBP10.75□□□□□ -0.69
CUX1-217ENST00000558836 FAM117BQ6P1L5 589 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 KIRREL3Q8IZU9 778 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 TEX9Q8N6V9 391 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 MAPK15Q8TD08 544 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 C1orf74Q96LT6 269 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 MCMBPQ9BTE3 642 aa10.75□□□□□ -0.69
CUX1-217ENST00000558836 ACE2Q9BYF1 805 aaPredicted RBP10.75□□□□□ -0.69
CUX1-217ENST00000558836 FAM95CA0A1B0GW59 222 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.74□□□□□ -0.69
CUX1-217ENST00000558836 NEMP2A6NFY4 417 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 EIF4E1BA6NMX2 242 aaKnown RBP10.74□□□□□ -0.69
CUX1-217ENST00000558836 E9PBE3 544 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 MUSKO15146 869 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 KLHL41O60662 606 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 GJB5O95377 273 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 CCND1P24385 295 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 CDC25CP30307 473 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 IDH3AP50213 366 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 NAGLUP54802 743 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 TAS2R39P59534 338 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 DLG1Q12959 904 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 TUBB3Q13509 450 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 MRPL58Q14197 206 aaKnown RBP10.74□□□□□ -0.69
CUX1-217ENST00000558836 INSCQ1MX18 579 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 STXBP5Q5T5C0 1151 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 NADSYN1Q6IA69 706 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 RPS27LQ71UM5 84 aaKnown RBP10.74□□□□□ -0.69
CUX1-217ENST00000558836 CLEC14AQ86T13 490 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 CENPLQ8N0S6 344 aaPredicted RBP10.74□□□□□ -0.69
CUX1-217ENST00000558836 FSTL5Q8N475 847 aaPredicted RBP10.74□□□□□ -0.69
CUX1-217ENST00000558836 OR52K2Q8NGK3 314 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 OR6P1Q8NGX9 317 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 DTX3LQ8TDB6 740 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 SH3RF2Q8TEC5 729 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 NSMCE1Q8WV22 266 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 ELMO2Q96JJ3 720 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 EXOC2Q96KP1 924 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 GPR22Q99680 433 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 GATA5Q9BWX5 397 aaPredicted RBP10.74□□□□□ -0.69
CUX1-217ENST00000558836 OSBPL1AQ9BXW6 950 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 NACA2Q9H009 215 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 RHOJQ9H4E5 214 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 COG4Q9H9E3 785 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 ENTPD7Q9NQZ7 604 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 TLR8Q9NR97 1041 aaKnown RBP10.74□□□□□ -0.69
CUX1-217ENST00000558836 UXTQ9UBK9 157 aaPredicted RBP10.74□□□□□ -0.69
CUX1-217ENST00000558836 APOBEC2Q9Y235 224 aaKnown RBP10.74□□□□□ -0.69
CUX1-217ENST00000558836 PATJQ8NI35 1801 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 MMP2P08253 660 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 MPSTP25325 297 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 OR1D2P34982 312 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 RENBPP51606 427 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 CCDC153Q494R4 210 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 PREPLQ4J6C6 727 aaPredicted RBP10.74□□□□□ -0.69
CUX1-217ENST00000558836 SLC9B1Q4ZJI4 515 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 UMODL1-AS1Q8N2C9 162 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 TMEM151AQ8N4L1 468 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 EFCAB3Q8N7B9 438 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.74□□□□□ -0.69
CUX1-217ENST00000558836 SLC43A3Q8NBI5 491 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 BTN2A3PQ96KV6 586 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 SMIM14Q96QK8 99 aa10.74□□□□□ -0.69
CUX1-217ENST00000558836 CCDC106Q9BWC9 280 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms