RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 PRR30Q53SZ7 412 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-206ENST00000558739 KIAA1161Q6NSJ0 714 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 PMF1Q6P1K2 205 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 LINGO4Q6UY18 593 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 PARS2Q7L3T8 475 aaKnown RBP12.1□□□□□ -0.47
SMAD3-206ENST00000558739 VPS36Q86VN1 386 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 TEX19Q8NA77 164 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 TMIEQ8NEW7 156 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 TMC2Q8TDI7 906 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 APOBEC4Q8WW27 367 aaKnown RBP12.1□□□□□ -0.47
SMAD3-206ENST00000558739 EEF2KMTQ96G04 330 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 SLC45A3Q96JT2 553 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 PRMT1Q99873 361 aaKnown RBP12.1□□□□□ -0.47
SMAD3-206ENST00000558739 NUDT22Q9BRQ3 303 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 CNGB3Q9NQW8 809 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 DYRK4Q9NR20 520 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 CUEDC1Q9NWM3 386 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-206ENST00000558739 ERRFI1Q9UJM3 462 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-206ENST00000558739 VPS28Q9UK41 221 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 DOLKQ9UPQ8 538 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 TLR6Q9Y2C9 796 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 WASF2Q9Y6W5 498 aa12.1□□□□□ -0.47
SMAD3-206ENST00000558739 LOC101059948A0A1B0GTJ6 334 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 TTLL8A6PVC2 850 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 RAD1O60671 282 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 CALCAP01258 141 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 NR3C1P04150 777 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 VASPP50552 380 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-206ENST00000558739 NEK3P51956 506 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 ALG11Q2TAA5 492 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 MAP9Q49MG5 647 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 LRRC73Q5JTD7 316 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 SYPL2Q5VXT5 272 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 CEP135Q66GS9 1140 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 DPY19L3Q6ZPD9 716 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 BRAPQ7Z569 592 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 ZC3H18Q86VM9 953 aaKnown RBP12.09□□□□□ -0.47
SMAD3-206ENST00000558739 HID1Q8IV36 788 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 ATP11CQ8NB49 1132 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 KCTD13Q8WZ19 329 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 ART4Q93070 314 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 TMEM159Q96B96 161 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 SERPINB11Q96P15 392 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 PSMB7Q99436 277 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 EPAS1Q99814 870 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 C1QTNF2Q9BXJ5 285 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 PRDM8Q9NQV8 689 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 MBNL1Q9NR56 388 aaKnown RBP12.09□□□□□ -0.47
SMAD3-206ENST00000558739 HS3ST2Q9Y278 367 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 MRPS18BQ9Y676 258 aaKnown RBP12.09□□□□□ -0.47
SMAD3-206ENST00000558739 ANKRD36A6QL64 1941 aa12.09□□□□□ -0.47
SMAD3-206ENST00000558739 TCAF2A6NFQ2 919 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 F5H5T6 163 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 O00370 1275 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 IKBKBO14920 756 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 ZNF821O75541 412 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-206ENST00000558739 PRNPP04156 253 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 PPARDQ03181 441 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 SLC12A1Q13621 1099 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 AMZ1Q400G9 498 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 CERCAMQ5T4B2 595 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 TMEM164Q5U3C3 297 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 C22orf39Q6P5X5 142 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 MACC1Q6ZN28 852 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 ASB18Q6ZVZ8 466 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 UNC13DQ70J99 1090 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 RD3Q7Z3Z2 195 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 SCML4Q8N228 414 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 EFCAB3Q8N7B9 438 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 KIAA0895Q8NCT3 520 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 GPR156Q8NFN8 814 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 GPBAR1Q8TDU6 330 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 CENPTQ96BT3 561 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 DHX58Q96C10 678 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 RNF31Q96EP0 1072 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 TBATAQ96M53 351 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 LENG8Q96PV6 779 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-206ENST00000558739 MIS12Q9H081 205 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 GPN2Q9H9Y4 310 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-206ENST00000558739 DONSONQ9NYP3 566 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 CGNQ9P2M7 1197 aaKnown RBP12.08□□□□□ -0.48
SMAD3-206ENST00000558739 IL36AQ9UHA7 158 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 VPS51Q9UID3 782 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 KCND3Q9UK17 655 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 APPL1Q9UKG1 709 aa12.08□□□□□ -0.48
SMAD3-206ENST00000558739 ZNF469Q96JG9 3925 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-206ENST00000558739 LDLRP01130 860 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 CD19P15391 556 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 GKP32189 559 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 EIF4A3P38919 411 aaKnown RBP12.07□□□□□ -0.48
SMAD3-206ENST00000558739 RECQLP46063 649 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-206ENST00000558739 VAMP7P51809 220 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 HK3P52790 923 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 NUCB2P80303 420 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 SGCGQ13326 291 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 KRTAP21-3Q3LHN1 58 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 FBXL22Q6P050 247 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 C16orf46Q6P387 395 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 TMEM135Q86UB9 458 aa12.07□□□□□ -0.48
SMAD3-206ENST00000558739 SLC9A9Q8IVB4 645 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms