RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 LMNAP02545 664 aaKnown RBP13.89□□□□□ -0.19
SHMT2-234ENST00000557703 CCNB1P14635 433 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 ITGB7P26010 798 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 MMP13P45452 471 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 DNA2P51530 1060 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 CCNHP51946 323 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-234ENST00000557703 POLR2LP62875 67 aaKnown RBP13.89□□□□□ -0.19
SHMT2-234ENST00000557703 NHLH1Q02575 133 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 GBE1Q04446 702 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 DMWDQ09019 674 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 HS1BP3Q53T59 392 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 ALG1LQ6GMV1 187 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 LAIR1Q6GTX8 287 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 RABEPKQ7Z6M1 372 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 CCDC13Q8IYE1 715 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 CCNYQ8ND76 341 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 ALG3Q92685 438 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 NKD2Q969F2 451 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-234ENST00000557703 MGME1Q9BQP7 344 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 ATP13A3Q9H7F0 1226 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 POLR3BQ9NW08 1133 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-234ENST00000557703 FBXL12Q9NXK8 326 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 HEY1Q9Y5J3 304 aa13.89□□□□□ -0.19
SHMT2-234ENST00000557703 A0A0U1RQJ8 604 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 LRRC72A6NJI9 287 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 SOCS5O75159 536 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 NEBLO76041 1014 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 PYGMP11217 842 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 MARCKSL1P49006 195 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 PXNP49023 591 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-234ENST00000557703 IFI35P80217 286 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-234ENST00000557703 SLC10A2Q12908 348 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-234ENST00000557703 PLK5Q496M5 336 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 ZNF805Q5CZA5 627 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 SYCP2LQ5T4T6 812 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 SEL1L2Q5TEA6 688 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 CCDC181Q5TID7 509 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 BRAT1Q6PJG6 821 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 REXO1L1PQ8IX06 675 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 GPR161Q8N6U8 529 aaKnown RBP13.88□□□□□ -0.19
SHMT2-234ENST00000557703 TFB1MQ8WVM0 346 aaKnown RBP13.88□□□□□ -0.19
SHMT2-234ENST00000557703 ZNF419Q96HQ0 510 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-234ENST00000557703 NUDCD1Q96RS6 583 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 TPSD1Q9BZJ3 242 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 POLR1EQ9GZS1 481 aaKnown RBP13.88□□□□□ -0.19
SHMT2-234ENST00000557703 LHX3Q9UBR4 397 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 ZKSCAN5Q9Y2L8 839 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 WASF2Q9Y6W5 498 aa13.88□□□□□ -0.19
SHMT2-234ENST00000557703 PTPRZ1P23471 2315 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-234ENST00000557703 OTOGLQ3ZCN5 2332 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 FAM186AA6NE01 2351 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 ABCA7Q8IZY2 2146 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 KPNA3O00505 521 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-234ENST00000557703 MID1O15344 667 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 AP1G1O43747 822 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 LEFTY1O75610 366 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 KRT10P13645 584 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 VAV1P15498 845 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 CA4P22748 312 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 SERPINA4P29622 427 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 SLC10A7Q0GE19 358 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 SLC14A2Q15849 920 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 ARSIQ5FYB1 569 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 WDR45BQ5MNZ6 344 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 KAZNQ674X7 775 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 PMS2CLQ68D20 193 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 GDPD4Q6W3E5 623 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 ERN2Q76MJ5 926 aaKnown RBP13.87□□□□□ -0.19
SHMT2-234ENST00000557703 SRLQ86TD4 932 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 SUMF1Q8NBK3 374 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 TSEN2Q8NCE0 465 aaKnown RBP13.87□□□□□ -0.19
SHMT2-234ENST00000557703 OR2T34Q8NGX1 318 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 TOE1Q96GM8 510 aaKnown RBP13.87□□□□□ -0.19
SHMT2-234ENST00000557703 PPP1R2P1Q96PQ5 205 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 IL12RB2Q99665 862 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 TM6SF2Q9BZW4 377 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 TNKS2Q9H2K2 1166 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 MTG2Q9H4K7 406 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 PREBQ9HCU5 417 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 HOMER3Q9NSC5 361 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 CYP8B1Q9UNU6 501 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 EP300Q09472 2414 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-234ENST00000557703 SDK1Q7Z5N4 2213 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 GPR179Q6PRD1 2367 aa13.87□□□□□ -0.19
SHMT2-234ENST00000557703 KRIT1O00522 736 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 CES2O00748 559 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 BNIP3LO60238 219 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 RNASEH2AO75792 299 aaKnown RBP13.86□□□□□ -0.19
SHMT2-234ENST00000557703 RETP07949 1114 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 CR2P20023 1033 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 PSMD8P48556 350 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 CCR5P51681 352 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 NEK3P51956 506 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 RPL6Q02878 288 aaKnown RBP13.86□□□□□ -0.19
SHMT2-234ENST00000557703 BCL2L1Q07817 233 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 KLF1Q13351 362 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-234ENST00000557703 PRKD1Q15139 912 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-234ENST00000557703 NOMO1Q15155 1222 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 TEX44Q53QW1 395 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 FBXL19Q6PCT2 694 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms