RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 NYNRINQ9P2P1 1898 aaKnown RBP17■□□□□ 0.31
NEK9-211ENST00000557673 DMTF1Q9Y222 760 aa17■□□□□ 0.31
NEK9-211ENST00000557673 EIF3CLB5ME19 914 aaKnown RBP16.99■□□□□ 0.31
NEK9-211ENST00000557673 CBX4O00257 560 aa16.99■□□□□ 0.31
NEK9-211ENST00000557673 NDUFA10O95299 355 aa16.99■□□□□ 0.31
NEK9-211ENST00000557673 PSMA2P25787 234 aa16.99■□□□□ 0.31
NEK9-211ENST00000557673 STK19P49842 368 aaPredicted RBP16.99■□□□□ 0.31
NEK9-211ENST00000557673 GSE1Q14687 1217 aa16.99■□□□□ 0.31
NEK9-211ENST00000557673 STAT4Q14765 748 aa16.99■□□□□ 0.31
NEK9-211ENST00000557673 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.99■□□□□ 0.31
NEK9-211ENST00000557673 ZNF564Q8TBZ8 553 aaPredicted RBP16.99■□□□□ 0.31
NEK9-211ENST00000557673 SLC39A7Q92504 469 aa16.99■□□□□ 0.31
NEK9-211ENST00000557673 FGF11Q92914 225 aa16.99■□□□□ 0.31
NEK9-211ENST00000557673 RPL10LQ96L21 214 aaKnown RBP16.99■□□□□ 0.31
NEK9-211ENST00000557673 EIF3CQ99613 913 aaKnown RBP16.99■□□□□ 0.31
NEK9-211ENST00000557673 PRORYQ9H606 182 aa16.99■□□□□ 0.31
NEK9-211ENST00000557673 UVRAGQ9P2Y5 699 aa16.99■□□□□ 0.31
NEK9-211ENST00000557673 ANAPC7Q9UJX3 599 aa16.99■□□□□ 0.31
NEK9-211ENST00000557673 INTUQ9ULD6 942 aa16.99■□□□□ 0.31
NEK9-211ENST00000557673 HELZ2Q9BYK8 2649 aaKnown RBP16.98■□□□□ 0.31
NEK9-211ENST00000557673 WNT9AO14904 365 aa16.98■□□□□ 0.31
NEK9-211ENST00000557673 ATXN7O15265 892 aaPredicted RBP16.98■□□□□ 0.31
NEK9-211ENST00000557673 CNTN5O94779 1100 aa16.98■□□□□ 0.31
NEK9-211ENST00000557673 DESP17661 470 aa16.98■□□□□ 0.31
NEK9-211ENST00000557673 ITPKBP27987 946 aa16.98■□□□□ 0.31
NEK9-211ENST00000557673 E2F1Q01094 437 aa16.98■□□□□ 0.31
NEK9-211ENST00000557673 HS1BP3Q53T59 392 aa16.98■□□□□ 0.31
NEK9-211ENST00000557673 ZNF683Q8IZ20 524 aa16.98■□□□□ 0.31
NEK9-211ENST00000557673 SNIP1Q8TAD8 396 aaKnown RBP16.98■□□□□ 0.31
NEK9-211ENST00000557673 RFFLQ8WZ73 363 aa16.98■□□□□ 0.31
NEK9-211ENST00000557673 EPN1Q9Y6I3 576 aaPredicted RBP16.98■□□□□ 0.31
NEK9-211ENST00000557673 PLXNA2O75051 1894 aa16.98■□□□□ 0.31
NEK9-211ENST00000557673 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.97■□□□□ 0.31
NEK9-211ENST00000557673 GLDCP23378 1020 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 ACTN2P35609 894 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 VASPP50552 380 aaPredicted RBP16.97■□□□□ 0.31
NEK9-211ENST00000557673 PLK1P53350 603 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 BNIP3Q12983 259 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 ZNF177Q13360 481 aaPredicted RBP16.97■□□□□ 0.31
NEK9-211ENST00000557673 SPA17Q15506 151 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 C5orf22Q49AR2 442 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 ALFQ53S48 1182 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 TRIM69Q86WT6 500 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 CCDC185Q8N715 623 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 NIPA2Q8N8Q9 360 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 CCDC112Q8NEF3 446 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 OR8D1Q8WZ84 308 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 NTAN1Q96AB6 310 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 ALG14Q96F25 216 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 CTTNBP2NLQ9P2B4 639 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 CLCA2Q9UQC9 943 aa16.97■□□□□ 0.31
NEK9-211ENST00000557673 REXO2Q9Y3B8 237 aaKnown RBP16.97■□□□□ 0.31
NEK9-211ENST00000557673 C1QTNF3-AMACRE9PGA6 284 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 PRAMEF26H0Y7S4 382 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 PLRG1O43660 514 aaKnown RBP16.96■□□□□ 0.31
NEK9-211ENST00000557673 TLX3O43711 291 aaPredicted RBP16.96■□□□□ 0.31
NEK9-211ENST00000557673 RNGTTO60942 597 aaKnown RBP16.96■□□□□ 0.31
NEK9-211ENST00000557673 LRCH4O75427 683 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 CLDN11O75508 207 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 MTA2O94776 668 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 IPO7O95373 1038 aaKnown RBP16.96■□□□□ 0.31
NEK9-211ENST00000557673 VAV1P15498 845 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 ACP1P24666 158 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 DRD3P35462 400 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 MAGEA1P43355 309 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 CDH4P55283 916 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 CLDN6P56747 220 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 PPP2CBP62714 309 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 PPP2CAP67775 309 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 CCDC15Q0P6D6 951 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 SETMARQ53H47 684 aaPredicted RBP16.96■□□□□ 0.31
NEK9-211ENST00000557673 RHOT2Q8IXI1 618 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 ARFGAP1Q8N6T3 406 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 ACRBPQ8NEB7 543 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 FAM131CQ96AQ9 280 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 PDLIM2Q96JY6 352 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 BTBD6Q96KE9 485 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 FCRL3Q96P31 734 aaPredicted RBP16.96■□□□□ 0.31
NEK9-211ENST00000557673 FEM1AQ9BSK4 669 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 LUC7LQ9NQ29 371 aaKnown RBP16.96■□□□□ 0.31
NEK9-211ENST00000557673 IP6K2Q9UHH9 426 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 SLC25A13Q9UJS0 675 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 PCDHA13Q9Y5I0 950 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 OR51B4Q9Y5P0 310 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 CHD5Q8TDI0 1954 aa16.96■□□□□ 0.31
NEK9-211ENST00000557673 TEX51A0A1B0GUA7 166 aa16.95■□□□□ 0.3
NEK9-211ENST00000557673 ALOX15BO15296 676 aa16.95■□□□□ 0.3
NEK9-211ENST00000557673 MAT2AP31153 395 aaKnown RBP16.95■□□□□ 0.3
NEK9-211ENST00000557673 ZNF211Q13398 564 aaPredicted RBP16.95■□□□□ 0.3
NEK9-211ENST00000557673 TCEAL1Q15170 157 aa16.95■□□□□ 0.3
NEK9-211ENST00000557673 ARL13BQ3SXY8 428 aa16.95■□□□□ 0.3
NEK9-211ENST00000557673 ACCSLQ4AC99 568 aa16.95■□□□□ 0.3
NEK9-211ENST00000557673 CYP4V2Q6ZWL3 525 aaPredicted RBP16.95■□□□□ 0.3
NEK9-211ENST00000557673 KANSL1Q7Z3B3 1105 aa16.95■□□□□ 0.3
NEK9-211ENST00000557673 TFAP2DQ7Z6R9 452 aa16.95■□□□□ 0.3
NEK9-211ENST00000557673 SPATS2Q86XZ4 545 aaKnown RBP16.95■□□□□ 0.3
NEK9-211ENST00000557673 DCBLD1Q8N8Z6 715 aa16.95■□□□□ 0.3
NEK9-211ENST00000557673 FRS2Q8WU20 508 aa16.95■□□□□ 0.3
NEK9-211ENST00000557673 ANP32BQ92688 251 aaKnown RBP16.95■□□□□ 0.3
NEK9-211ENST00000557673 HAPLN3Q96S86 360 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms