RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 GSTA3Q16772 222 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 DCLRE1AQ6PJP8 1040 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 C14orf80Q86SX3 495 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 LDB1Q86U70 411 aaPredicted RBP17.94■□□□□ 0.46
XRCC3-218ENST00000557439 SREK1Q8WXA9 508 aaKnown RBP17.94■□□□□ 0.46
XRCC3-218ENST00000557439 CASP10Q92851 521 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 TSNARE1Q96NA8 513 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 NR1H4Q96RI1 486 aaPredicted RBP17.94■□□□□ 0.46
XRCC3-218ENST00000557439 AP5M1Q9H0R1 490 aa17.94■□□□□ 0.46
XRCC3-218ENST00000557439 MAFKO60675 156 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 DDHD2O94830 711 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 MT-CO1P00395 513 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 F9P00740 461 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 HDCP19113 662 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 ARCN1P48444 511 aaKnown RBP17.93■□□□□ 0.46
XRCC3-218ENST00000557439 MAXP61244 160 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 PURAQ00577 322 aaKnown RBP17.93■□□□□ 0.46
XRCC3-218ENST00000557439 NSUN2Q08J23 767 aaKnown RBP eCLIP17.93■□□□□ 0.46
XRCC3-218ENST00000557439 MAP2K5Q13163 448 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 CEACAM7Q14002 265 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 FSCN1Q16658 493 aaKnown RBP17.93■□□□□ 0.46
XRCC3-218ENST00000557439 PCID2Q5JVF3 399 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 CXCL17Q6UXB2 119 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 ADGRG6Q86SQ4 1221 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 HEXDCQ8WVB3 486 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 TMA16Q96EY4 203 aaKnown RBP17.93■□□□□ 0.46
XRCC3-218ENST00000557439 GLOD4Q9HC38 313 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 RBM22Q9NW64 420 aaKnown RBP eCLIP17.93■□□□□ 0.46
XRCC3-218ENST00000557439 ZNF236Q9UL36 1845 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 RGSL1A5PLK6 1076 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 CABYRO75952 493 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 ETS2P15036 469 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 VCLP18206 1134 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 TSPAN8P19075 237 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 CYLC2Q14093 348 aaPredicted RBP17.93■□□□□ 0.46
XRCC3-218ENST00000557439 CSHL1Q14406 222 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 UPP1Q16831 310 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 SH2D4BQ5SQS7 431 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 PTAR1Q7Z6K3 402 aaPredicted RBP17.93■□□□□ 0.46
XRCC3-218ENST00000557439 SDCCAG8Q86SQ7 713 aaPredicted RBP17.93■□□□□ 0.46
XRCC3-218ENST00000557439 GTSE1Q9NYZ3 720 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 RAD54BQ9Y620 910 aa17.93■□□□□ 0.46
XRCC3-218ENST00000557439 NYNRINQ9P2P1 1898 aaKnown RBP17.93■□□□□ 0.46
XRCC3-218ENST00000557439 MGEA5O60502 916 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 CHRNA1P02708 482 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 STMN1P16949 149 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 CPT1AP50416 773 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 RAB10P61026 200 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 MRPS6P82932 125 aaKnown RBP17.92■□□□□ 0.46
XRCC3-218ENST00000557439 INTS6LQ5JSJ4 861 aaKnown RBP17.92■□□□□ 0.46
XRCC3-218ENST00000557439 SLC30A9Q6PML9 568 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 GK5Q6ZS86 529 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 TMEM86AQ8N2M4 240 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 KYQ8NBH2 561 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 SH3RF2Q8TEC5 729 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 FCRL2Q96LA5 508 aaPredicted RBP17.92■□□□□ 0.46
XRCC3-218ENST00000557439 VAT1Q99536 393 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 OSBPL2Q9H1P3 480 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 CDYLQ9Y232 598 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 COPG1Q9Y678 874 aaKnown RBP17.92■□□□□ 0.46
XRCC3-218ENST00000557439 PTCH2Q9Y6C5 1203 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 FESP07332 822 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 THRAP10827 490 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 UQCRBP14927 111 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 PRKAA1Q13131 559 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 MED21Q13503 144 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 HNRNPDQ14103 355 aaKnown RBP17.92■□□□□ 0.46
XRCC3-218ENST00000557439 MMEL1Q495T6 779 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 MORN1Q5T089 497 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 JADE3Q92613 823 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 FSD1LQ9BXM9 530 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 POMKQ9H5K3 350 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 SPATS2LQ9NUQ6 558 aaKnown RBP17.92■□□□□ 0.46
XRCC3-218ENST00000557439 SLC38A7Q9NVC3 462 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 SLC45A1Q9Y2W3 748 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 HTTP42858 3142 aa17.92■□□□□ 0.46
XRCC3-218ENST00000557439 MYOCOSA0A1B0GUC4 107 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 PRDX6P30041 224 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 PPARGP37231 505 aaPredicted RBP17.91■□□□□ 0.46
XRCC3-218ENST00000557439 PAPOLAP51003 745 aaKnown RBP17.91■□□□□ 0.46
XRCC3-218ENST00000557439 FLOT2Q14254 428 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 FRG1Q14331 258 aaKnown RBP17.91■□□□□ 0.46
XRCC3-218ENST00000557439 GK3PQ14409 553 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 METTL21CQ5VZV1 264 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 GDF6Q6KF10 455 aaPredicted RBP17.91■□□□□ 0.46
XRCC3-218ENST00000557439 ACAD11Q709F0 780 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 TFAP2DQ7Z6R9 452 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 KDM1BQ8NB78 822 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 OLFM1Q99784 485 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 COPS7BQ9H9Q2 264 aaPredicted RBP17.91■□□□□ 0.46
XRCC3-218ENST00000557439 CSNK1G1Q9HCP0 422 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 ALDH1A3P47895 512 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 IRX1P78414 480 aaPredicted RBP17.91■□□□□ 0.46
XRCC3-218ENST00000557439 PPP1R3AQ16821 1122 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 ZNF423Q2M1K9 1284 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 ARTNQ5T4W7 220 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 SPRYD7Q5W111 196 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 BNC2Q6ZN30 1099 aaPredicted RBP17.91■□□□□ 0.46
XRCC3-218ENST00000557439 LINC00523Q86TU6 105 aa17.91■□□□□ 0.46
XRCC3-218ENST00000557439 PCDH20Q8N6Y1 951 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms