RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 D6RAR5 112 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 SLC16A3O15427 465 aaKnown RBP12.78□□□□□ -0.36
PSEN1-221ENST00000557293 PRAMEF10O60809 474 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 PAGE1O75459 146 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 ENDOD1O94919 500 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 CD160O95971 181 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 ANXA6P08133 673 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 ITIH1P19827 911 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 ITGB7P26010 798 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 PRCPP42785 496 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 CLCN6P51797 869 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 NDUFA8P51970 172 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 CDK17Q00537 523 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 OTUD1Q5VV17 481 aaPredicted RBP12.78□□□□□ -0.36
PSEN1-221ENST00000557293 NYAP1Q6ZVC0 841 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 PARS2Q7L3T8 475 aaKnown RBP12.78□□□□□ -0.36
PSEN1-221ENST00000557293 RRAGAQ7L523 313 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 PTRH1Q86Y79 214 aaKnown RBP12.78□□□□□ -0.36
PSEN1-221ENST00000557293 PPM1KQ8N3J5 372 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 GLMNQ92990 594 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 RNF34Q969K3 372 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 CCDC47Q96A33 483 aaKnown RBP12.78□□□□□ -0.36
PSEN1-221ENST00000557293 CCDC74AQ96AQ1 378 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 CCDC114Q96M63 670 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 NT5C1BQ96P26 610 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 GFM1Q96RP9 751 aaKnown RBP12.78□□□□□ -0.36
PSEN1-221ENST00000557293 SLC12A9Q9BXP2 914 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 MUC3BQ9H195 1237 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 EPN3Q9H201 632 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 FOXJ2Q9P0K8 574 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 COX16Q9P0S2 106 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 GULP1Q9UBP9 304 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 PISDQ9UG56 409 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 SNX10Q9Y5X0 201 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 LRRK2Q5S007 2527 aa12.78□□□□□ -0.36
PSEN1-221ENST00000557293 USP9YO00507 2555 aaPredicted RBP12.77□□□□□ -0.36
PSEN1-221ENST00000557293 C9orf172C9J069 976 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 K7ELQ4 463 aaPredicted RBP12.77□□□□□ -0.37
PSEN1-221ENST00000557293 IGFALSP35858 605 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 SYKP43405 635 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 SGCGQ13326 291 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 PKP1Q13835 747 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 MANEAQ5SRI9 462 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 ESRP1Q6NXG1 681 aaKnown RBP12.77□□□□□ -0.37
PSEN1-221ENST00000557293 KRBA2Q6ZNG9 492 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 TMPRSS9Q7Z410 1059 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 SDR16C5Q8N3Y7 309 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 DCAF4L2Q8NA75 395 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 KYQ8NBH2 561 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 DENND6BQ8NEG7 585 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 OR7D4Q8NG98 312 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 ZNF606Q8WXB4 792 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 PPP1R16AQ96I34 528 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 MED15Q96RN5 788 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 HEPHQ9BQS7 1158 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 C2orf49Q9BVC5 232 aaPredicted RBP12.77□□□□□ -0.37
PSEN1-221ENST00000557293 TRIM62Q9BVG3 475 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 SIK2Q9H0K1 926 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 LRRN3Q9H3W5 708 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 SYNDIG1Q9H7V2 258 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 FAM204AQ9H8W3 233 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 ACP6Q9NPH0 428 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 MBNL1Q9NR56 388 aaKnown RBP12.77□□□□□ -0.37
PSEN1-221ENST00000557293 ZNF212Q9UDV6 495 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 SEPT3Q9UH03 358 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 ARMCX3Q9UH62 379 aaPredicted RBP12.77□□□□□ -0.37
PSEN1-221ENST00000557293 ITM2BQ9Y287 266 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 ACTL7AQ9Y615 435 aa12.77□□□□□ -0.37
PSEN1-221ENST00000557293 USP9XQ93008 2570 aaPredicted RBP12.77□□□□□ -0.37
PSEN1-221ENST00000557293 ZFC3H1O60293 1989 aaKnown RBP12.76□□□□□ -0.37
PSEN1-221ENST00000557293 UNC13CQ8NB66 2214 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 NBASA2RRP1 2371 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 TMX2-CTNND1H3BSU7 103 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 TSPAN6O43657 245 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 ADCY5O95622 1261 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 RPLP0P05388 317 aaKnown RBP12.76□□□□□ -0.37
PSEN1-221ENST00000557293 RHOCP08134 193 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 TFE3P19532 575 aaPredicted RBP12.76□□□□□ -0.37
PSEN1-221ENST00000557293 GKP32189 559 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 FKBP3Q00688 224 aaKnown RBP12.76□□□□□ -0.37
PSEN1-221ENST00000557293 SERINC3Q13530 473 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 MEA1Q16626 185 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 CARD16Q5EG05 197 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 FAXCQ5TGI0 409 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 SETD3Q86TU7 594 aaPredicted RBP12.76□□□□□ -0.37
PSEN1-221ENST00000557293 ZSCAN30Q86W11 494 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 EHBP1Q8NDI1 1231 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 ZNF564Q8TBZ8 553 aaPredicted RBP12.76□□□□□ -0.37
PSEN1-221ENST00000557293 USP7Q93009 1102 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 SRRTQ9BXP5 876 aaKnown RBP12.76□□□□□ -0.37
PSEN1-221ENST00000557293 CPEB1Q9BZB8 566 aaKnown RBP12.76□□□□□ -0.37
PSEN1-221ENST00000557293 STRADBQ9C0K7 418 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 ADNPQ9H2P0 1102 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 ASNSD1Q9NWL6 643 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 CFAP45Q9UL16 551 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 LOXL2Q9Y4K0 774 aa12.76□□□□□ -0.37
PSEN1-221ENST00000557293 TRIM49BA6NDI0 452 aa12.75□□□□□ -0.37
PSEN1-221ENST00000557293 C16orf96A6NNT2 1141 aa12.75□□□□□ -0.37
PSEN1-221ENST00000557293 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-221ENST00000557293 AGRPO00253 132 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms