RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.89□□□□□ -0.99
VRK1-206ENST00000557222 TRIM49BA6NDI0 452 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 TLX3O43711 291 aaPredicted RBP8.89□□□□□ -0.99
VRK1-206ENST00000557222 CLDN11O75508 207 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 PDGFRAP16234 1089 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 GLDCP23378 1020 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 PPP2CBP62714 309 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 PPP2CAP67775 309 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 SEMG2Q02383 582 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 ZNF177Q13360 481 aaPredicted RBP8.89□□□□□ -0.99
VRK1-206ENST00000557222 DLG2Q15700 870 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 C5orf22Q49AR2 442 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 HS1BP3Q53T59 392 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 AGBL4Q5VU57 503 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 CXorf57Q6NSI4 855 aaKnown RBP8.89□□□□□ -0.99
VRK1-206ENST00000557222 TTI2Q6NXR4 508 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 C16orf46Q6P387 395 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 CAPN12Q6ZSI9 719 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 RRAGAQ7L523 313 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 ZSCAN30Q86W11 494 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 DCP2Q8IU60 420 aaKnown RBP8.89□□□□□ -0.99
VRK1-206ENST00000557222 ARHGEF19Q8IW93 802 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 TRIM59Q8IWR1 403 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 LSMEM2Q8N112 164 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 TMIEQ8NEW7 156 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 ZNF606Q8WXB4 792 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 KAT5Q92993 513 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 ALG14Q96F25 216 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 KLHDC7BQ96G42 594 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 KREMEN1Q96MU8 473 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 SLC2A13Q96QE2 648 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 FEM1AQ9BSK4 669 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 SRRTQ9BXP5 876 aaKnown RBP8.89□□□□□ -0.99
VRK1-206ENST00000557222 RRN3Q9NYV6 651 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 XPO7Q9UIA9 1087 aaKnown RBP8.89□□□□□ -0.99
VRK1-206ENST00000557222 CLCA2Q9UQC9 943 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 HS3ST2Q9Y278 367 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 TBC1D30Q9Y2I9 924 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 OR51B4Q9Y5P0 310 aa8.89□□□□□ -0.99
VRK1-206ENST00000557222 MYLKQ15746 1914 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 E5RJQ4 531 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 CBX4O00257 560 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 HSF2BPO75031 334 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 RTN2O75298 545 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 LETM1O95202 739 aaPredicted RBP8.88□□□□□ -0.99
VRK1-206ENST00000557222 FGFR1OPO95684 399 aaKnown RBP8.88□□□□□ -0.99
VRK1-206ENST00000557222 AFPP02771 609 aaKnown RBP8.88□□□□□ -0.99
VRK1-206ENST00000557222 GP1BAP07359 652 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 RARAP10276 462 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 KRT5P13647 590 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 ZNF18P17022 549 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 ITPKBP27987 946 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 STK19P49842 368 aaPredicted RBP8.88□□□□□ -0.99
VRK1-206ENST00000557222 CDH4P55283 916 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 KRT83P78385 493 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 CNTN1Q12860 1018 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 PDCLQ13371 301 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 TBC1D25Q3MII6 688 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 FBXL22Q6P050 247 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 DENND1BQ6P3S1 775 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 GPR155Q7Z3F1 870 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 SH2D3CQ8N5H7 860 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 TMEM145Q8NBT3 493 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 OR4C6Q8NH72 309 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 PIP4K2CQ8TBX8 421 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 GRAMD1AQ96CP6 724 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 WBP1Q96G27 269 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 CCDC114Q96M63 670 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 ZNF578Q96N58 590 aaPredicted RBP8.88□□□□□ -0.99
VRK1-206ENST00000557222 UBE2TQ9NPD8 197 aaPredicted RBP8.88□□□□□ -0.99
VRK1-206ENST00000557222 SARDHQ9UL12 918 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.88□□□□□ -0.99
VRK1-206ENST00000557222 HS3ST3A1Q9Y663 406 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 SPTA1P02549 2419 aa8.88□□□□□ -0.99
VRK1-206ENST00000557222 CXorf51AA0A1B0GTR3 108 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 NEMP2A6NFY4 417 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 THAP12O43422 761 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 SIGLEC6O43699 453 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 BRINP1O60477 761 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 MT-CO3P00414 261 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 PRNPP04156 253 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 FURINP09958 794 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 ALPPL2P10696 532 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 CKMT1AP12532 417 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 VAV1P15498 845 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 DGKAP23743 735 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 GNA15P30679 374 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 AKT2P31751 481 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 DUSP3P51452 185 aaPredicted RBP8.87□□□□□ -0.99
VRK1-206ENST00000557222 UCNP55089 124 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 ERVPABLB-1P60509 514 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 AUHQ13825 339 aaKnown RBP8.87□□□□□ -0.99
VRK1-206ENST00000557222 PCSK7Q16549 785 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 ACCSLQ4AC99 568 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 CDCP2Q5VXM1 449 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 IGF2-ASQ6U949 168 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 SETD3Q86TU7 594 aaPredicted RBP8.87□□□□□ -0.99
VRK1-206ENST00000557222 HORMAD1Q86X24 394 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 ZDHHC17Q8IUH5 632 aa8.87□□□□□ -0.99
VRK1-206ENST00000557222 DEFB106AQ8N104 65 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms