RNA–Protein interactions for RNA: ENST00000557181.5

APEX1-217, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-217ENST00000557181 CD248Q9HCU0 757 aa12.92□□□□□ -0.34
APEX1-217ENST00000557181 NT5MQ9NPB1 228 aa12.92□□□□□ -0.34
APEX1-217ENST00000557181 SCUBE2Q9NQ36 999 aa12.92□□□□□ -0.34
APEX1-217ENST00000557181 ITM2CQ9NQX7 267 aa12.92□□□□□ -0.34
APEX1-217ENST00000557181 LHX3Q9UBR4 397 aa12.92□□□□□ -0.34
APEX1-217ENST00000557181 EVLQ9UI08 416 aaPredicted RBP12.92□□□□□ -0.34
APEX1-217ENST00000557181 JRKLQ9Y4A0 524 aa12.92□□□□□ -0.34
APEX1-217ENST00000557181 A0A1W2PP55 124 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 HACD1B0YJ81 288 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 APOC4-APOC2K7ER74 178 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 MTSS1O43312 755 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 LEFTY1O75610 366 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 ZNF189O75820 626 aaPredicted RBP12.91□□□□□ -0.34
APEX1-217ENST00000557181 STK10O94804 968 aaKnown RBP12.91□□□□□ -0.34
APEX1-217ENST00000557181 APOC2P02655 101 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 UGT2B4P06133 528 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 CCNB1P14635 433 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 PECAM1P16284 738 aaPredicted RBP12.91□□□□□ -0.34
APEX1-217ENST00000557181 SERPINA4P29622 427 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 P2RY2P41231 377 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 SCNN1BP51168 640 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 ZNF33AQ06730 810 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 SLC10A7Q0GE19 358 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 SLC10A2Q12908 348 aaPredicted RBP12.91□□□□□ -0.34
APEX1-217ENST00000557181 HNRNPDQ14103 355 aaKnown RBP12.91□□□□□ -0.34
APEX1-217ENST00000557181 AADACL2Q6P093 401 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 LPCAT2Q7L5N7 544 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 SRLQ86TD4 932 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 ZC3H18Q86VM9 953 aaKnown RBP12.91□□□□□ -0.34
APEX1-217ENST00000557181 CDKL3Q8IVW4 592 aaPredicted RBP12.91□□□□□ -0.34
APEX1-217ENST00000557181 SLC35F6Q8N357 371 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 TSEN2Q8NCE0 465 aaKnown RBP12.91□□□□□ -0.34
APEX1-217ENST00000557181 NELL1Q92832 810 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 TOE1Q96GM8 510 aaKnown RBP12.91□□□□□ -0.34
APEX1-217ENST00000557181 PSKH2Q96QS6 385 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 CARD9Q9H257 536 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 ATP13A3Q9H7F0 1226 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 SGK2Q9HBY8 427 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 RBM22Q9NW64 420 aaKnown RBP eCLIP12.91□□□□□ -0.34
APEX1-217ENST00000557181 USP36Q9P275 1121 aaKnown RBP12.91□□□□□ -0.34
APEX1-217ENST00000557181 SAE1Q9UBE0 346 aaPredicted RBP12.91□□□□□ -0.34
APEX1-217ENST00000557181 PPM1HQ9ULR3 514 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 FZD4Q9ULV1 537 aa12.91□□□□□ -0.34
APEX1-217ENST00000557181 IGHV1OR15-9A0A0B4J2B8 117 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.9□□□□□ -0.34
APEX1-217ENST00000557181 FAM47DPA6NHR8 397 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 LRRC72A6NJI9 287 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 MEI4A8MW99 385 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 ENC1O14682 589 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 HRO43593 1189 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 CEP104O60308 925 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 LILRB5O75023 590 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 ZNF821O75541 412 aaPredicted RBP12.9□□□□□ -0.34
APEX1-217ENST00000557181 CA4P22748 312 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 DHPSP49366 369 aaPredicted RBP12.9□□□□□ -0.34
APEX1-217ENST00000557181 EIF3EP60228 445 aaKnown RBP12.9□□□□□ -0.34
APEX1-217ENST00000557181 GNG11P61952 73 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 AP1S1P61966 158 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 OTUD4Q01804 1114 aaKnown RBP12.9□□□□□ -0.34
APEX1-217ENST00000557181 BCL2L1Q07817 233 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 NSUN2Q08J23 767 aaKnown RBP eCLIP12.9□□□□□ -0.34
APEX1-217ENST00000557181 XRCC4Q13426 336 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 LPAL2Q16609 132 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 MAP7D1Q3KQU3 841 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 FBXL19Q6PCT2 694 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 DARS2Q6PI48 645 aaKnown RBP12.9□□□□□ -0.34
APEX1-217ENST00000557181 GDPD4Q6W3E5 623 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.9□□□□□ -0.34
APEX1-217ENST00000557181 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.9□□□□□ -0.34
APEX1-217ENST00000557181 FAM160A2Q8N612 972 aaPredicted RBP12.9□□□□□ -0.34
APEX1-217ENST00000557181 OR14C36Q8NHC7 312 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 LRRN4Q8WUT4 740 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 MAIP1Q8WWC4 291 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 MAML1Q92585 1016 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 FATE1Q969F0 183 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 OLFM3Q96PB7 478 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 TUBGCP5Q96RT8 1024 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 HINFPQ9BQA5 517 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 POLR1EQ9GZS1 481 aaKnown RBP12.9□□□□□ -0.34
APEX1-217ENST00000557181 AMACRQ9UHK6 382 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 GMEB2Q9UKD1 530 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 SMG5Q9UPR3 1016 aaKnown RBP12.9□□□□□ -0.34
APEX1-217ENST00000557181 ARIH1Q9Y4X5 557 aaPredicted RBP12.9□□□□□ -0.34
APEX1-217ENST00000557181 WASF2Q9Y6W5 498 aa12.9□□□□□ -0.34
APEX1-217ENST00000557181 PRR23AA6NEV1 266 aa12.89□□□□□ -0.35
APEX1-217ENST00000557181 USP27XA6NNY8 438 aa12.89□□□□□ -0.35
APEX1-217ENST00000557181 KCNK1O00180 336 aa12.89□□□□□ -0.35
APEX1-217ENST00000557181 NEMP1O14524 444 aa12.89□□□□□ -0.35
APEX1-217ENST00000557181 SLC7A4O43246 635 aa12.89□□□□□ -0.35
APEX1-217ENST00000557181 SEMA4FO95754 770 aa12.89□□□□□ -0.35
APEX1-217ENST00000557181 JCHAINP01591 159 aa12.89□□□□□ -0.35
APEX1-217ENST00000557181 CTSLP07711 333 aa12.89□□□□□ -0.35
APEX1-217ENST00000557181 CES1P23141 567 aa12.89□□□□□ -0.35
APEX1-217ENST00000557181 NFKBIAP25963 317 aa12.89□□□□□ -0.35
APEX1-217ENST00000557181 ITGB7P26010 798 aa12.89□□□□□ -0.35
APEX1-217ENST00000557181 GKP32189 559 aa12.89□□□□□ -0.35
APEX1-217ENST00000557181 TNNT3P45378 269 aaPredicted RBP12.89□□□□□ -0.35
APEX1-217ENST00000557181 CSNK1DP48730 415 aa12.89□□□□□ -0.35
APEX1-217ENST00000557181 NEK3P51956 506 aa12.89□□□□□ -0.35
APEX1-217ENST00000557181 MAXP61244 160 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms