RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 RNF168Q8IYW5 571 aaPredicted RBP15.03■□□□□ -0
CUX1-215ENST00000556210 LATS2Q9NRM7 1088 aa15.03■□□□□ -0
CUX1-215ENST00000556210 RGS18Q9NS28 235 aa15.03■□□□□ -0
CUX1-215ENST00000556210 UXTQ9UBK9 157 aaPredicted RBP15.03■□□□□ -0
CUX1-215ENST00000556210 SUN2Q9UH99 717 aa15.03■□□□□ -0
CUX1-215ENST00000556210 KATNA1O75449 491 aa15.03■□□□□ -0
CUX1-215ENST00000556210 GPR15P49685 360 aa15.03■□□□□ -0
CUX1-215ENST00000556210 CCNG1P51959 295 aa15.03■□□□□ -0
CUX1-215ENST00000556210 RALGDSQ12967 914 aa15.03■□□□□ -0
CUX1-215ENST00000556210 SEMA3CQ99985 751 aa15.03■□□□□ -0
CUX1-215ENST00000556210 EFHD1Q9BUP0 239 aa15.03■□□□□ -0
CUX1-215ENST00000556210 C20orf27Q9GZN8 174 aa15.03■□□□□ -0
CUX1-215ENST00000556210 EBF3Q9H4W6 596 aa15.03■□□□□ -0
CUX1-215ENST00000556210 CD274Q9NZQ7 290 aa15.03■□□□□ -0
CUX1-215ENST00000556210 PPM1HQ9ULR3 514 aa15.03■□□□□ -0
CUX1-215ENST00000556210 BTRCQ9Y297 605 aa15.03■□□□□ -0
CUX1-215ENST00000556210 COL4A5P29400 1685 aa15.03■□□□□ -0
CUX1-215ENST00000556210 SDK1Q7Z5N4 2213 aa15.03■□□□□ -0
CUX1-215ENST00000556210 TCRBV5S1A1TA0A578 114 aa15.02■□□□□ -0
CUX1-215ENST00000556210 GLTPD2A6NH11 291 aa15.02■□□□□ -0
CUX1-215ENST00000556210 AP2A1O95782 977 aa15.02■□□□□ -0
CUX1-215ENST00000556210 TFEBP19484 476 aa15.02■□□□□ -0
CUX1-215ENST00000556210 FMO4P31512 558 aa15.02■□□□□ -0
CUX1-215ENST00000556210 IDH3AP50213 366 aa15.02■□□□□ -0
CUX1-215ENST00000556210 DSC2Q02487 901 aa15.02■□□□□ -0
CUX1-215ENST00000556210 CDC16Q13042 620 aa15.02■□□□□ -0
CUX1-215ENST00000556210 POLD3Q15054 466 aaPredicted RBP15.02■□□□□ -0
CUX1-215ENST00000556210 MARCH8Q5T0T0 291 aa15.02■□□□□ -0
CUX1-215ENST00000556210 RELL1Q8IUW5 271 aa15.02■□□□□ -0
CUX1-215ENST00000556210 UBR7Q8N806 425 aa15.02■□□□□ -0
CUX1-215ENST00000556210 BHLHE22Q8NFJ8 381 aaPredicted RBP15.02■□□□□ -0
CUX1-215ENST00000556210 OR6K2Q8NGY2 324 aa15.02■□□□□ -0
CUX1-215ENST00000556210 TRHDEQ9UKU6 1024 aa15.02■□□□□ -0
CUX1-215ENST00000556210 KCNH4Q9UQ05 1017 aa15.02■□□□□ -0
CUX1-215ENST00000556210 CAPN8A6NHC0 703 aa15.02■□□□□ -0
CUX1-215ENST00000556210 UBDO15205 165 aa15.02■□□□□ -0
CUX1-215ENST00000556210 SLC18A1P54219 525 aa15.02■□□□□ -0
CUX1-215ENST00000556210 TAS2R39P59534 338 aa15.02■□□□□ -0
CUX1-215ENST00000556210 CRYBG2Q8N1P7 616 aa15.02■□□□□ -0
CUX1-215ENST00000556210 FSTL5Q8N475 847 aaPredicted RBP15.02■□□□□ -0
CUX1-215ENST00000556210 SEMA4BQ9NPR2 832 aaPredicted RBP15.02■□□□□ -0
CUX1-215ENST00000556210 DNAJC25-GNG10A0A024R161 153 aa15.02□□□□□ -0.01
CUX1-215ENST00000556210 ARHGEF37A1IGU5 675 aa15.02□□□□□ -0.01
CUX1-215ENST00000556210 E7ESA3 106 aa15.02□□□□□ -0.01
CUX1-215ENST00000556210 SRP72O76094 671 aaKnown RBP15.02□□□□□ -0.01
CUX1-215ENST00000556210 GUCA1CO95843 209 aa15.02□□□□□ -0.01
CUX1-215ENST00000556210 NPY2RP49146 381 aa15.02□□□□□ -0.01
CUX1-215ENST00000556210 WASHC5Q12768 1159 aa15.02□□□□□ -0.01
CUX1-215ENST00000556210 SPRYD7Q5W111 196 aa15.02□□□□□ -0.01
CUX1-215ENST00000556210 C16orf89Q6UX73 402 aa15.02□□□□□ -0.01
CUX1-215ENST00000556210 GK5Q6ZS86 529 aa15.02□□□□□ -0.01
CUX1-215ENST00000556210 DCP1BQ8IZD4 617 aaKnown RBP15.02□□□□□ -0.01
CUX1-215ENST00000556210 LGI2Q8N0V4 545 aa15.02□□□□□ -0.01
CUX1-215ENST00000556210 TOP6BLQ8N6T0 577 aa15.02□□□□□ -0.01
CUX1-215ENST00000556210 NPWQ8N729 165 aa15.02□□□□□ -0.01
CUX1-215ENST00000556210 SENP6Q9GZR1 1112 aaPredicted RBP15.02□□□□□ -0.01
CUX1-215ENST00000556210 ABCG8Q9H221 673 aa15.02□□□□□ -0.01
CUX1-215ENST00000556210 MARCH2Q9P0N8 246 aa15.02□□□□□ -0.01
CUX1-215ENST00000556210 CDH9Q9ULB4 789 aa15.02□□□□□ -0.01
CUX1-215ENST00000556210 MOXD2PA6NHM9 499 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 SAC3D1A6NKF1 404 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 TGDSO95455 350 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 CHEK2O96017 543 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 ESRRGP62508 458 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 PLOD1Q02809 727 aaPredicted RBP15.01□□□□□ -0.01
CUX1-215ENST00000556210 SLC18A2Q05940 514 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 KLF10Q13118 480 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 PDK3Q15120 406 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 AMIGO2Q86SJ2 522 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 ZBTB46Q86UZ6 589 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 ANKLE1Q8NAG6 615 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 LPCAT1Q8NF37 534 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 C7orf26Q96N11 449 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 GRIP2Q9C0E4 1043 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 MID1IP1Q9NPA3 183 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 MYADML2A6NDP7 307 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 FAM159BA6NKW6 160 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 MAGEC1O60732 1142 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 ASGR1P07306 291 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 PRKAA1Q13131 559 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 FAM187BQ17R55 369 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 PCID2Q5JVF3 399 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 CNSTQ6PJW8 725 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 ARCQ7LC44 396 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 RBBP8Q99708 897 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 UBE2OQ9C0C9 1292 aaKnown RBP15.01□□□□□ -0.01
CUX1-215ENST00000556210 SLC39A8Q9C0K1 460 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 HDAC3O15379 428 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 CNPY1Q3B7I2 92 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 DNAJC14Q6Y2X3 702 aaPredicted RBP15.01□□□□□ -0.01
CUX1-215ENST00000556210 FAM81AQ8TBF8 368 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 NCLNQ969V3 563 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 PRPF18Q99633 342 aaKnown RBP15.01□□□□□ -0.01
CUX1-215ENST00000556210 AGO3Q9H9G7 860 aaKnown RBP15.01□□□□□ -0.01
CUX1-215ENST00000556210 WDR41Q9HAD4 459 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 EML4Q9HC35 981 aaKnown RBP15.01□□□□□ -0.01
CUX1-215ENST00000556210 SSU72Q9NP77 194 aaKnown RBP15.01□□□□□ -0.01
CUX1-215ENST00000556210 UBR3Q6ZT12 1888 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 F8W8V4 182 aa15.01□□□□□ -0.01
CUX1-215ENST00000556210 TRAFD1O14545 582 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms