RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 FEM1CQ96JP0 617 aa20.07■□□□□ 0.8
PRKCH-219ENST00000555906 SLC17A9Q9BYT1 436 aa20.07■□□□□ 0.8
PRKCH-219ENST00000555906 NLGN3Q9NZ94 848 aa20.07■□□□□ 0.8
PRKCH-219ENST00000555906 DNAI1Q9UI46 699 aa20.07■□□□□ 0.8
PRKCH-219ENST00000555906 HPCAL4Q9UM19 191 aa20.07■□□□□ 0.8
PRKCH-219ENST00000555906 CLCA2Q9UQC9 943 aa20.07■□□□□ 0.8
PRKCH-219ENST00000555906 FAM72CH0Y354 149 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 FFAR2O15552 330 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 GJB6O95452 261 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 CALB1P05937 261 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 PLEKP08567 350 aaPredicted RBP20.06■□□□□ 0.8
PRKCH-219ENST00000555906 GIMD1P0DJR0 217 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 KRT3P12035 628 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 E2F1Q01094 437 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 MAPK8IP2Q13387 824 aaPredicted RBP20.06■□□□□ 0.8
PRKCH-219ENST00000555906 COL9A2Q14055 689 aaPredicted RBP20.06■□□□□ 0.8
PRKCH-219ENST00000555906 POLD3Q15054 466 aaPredicted RBP20.06■□□□□ 0.8
PRKCH-219ENST00000555906 FAM72AQ5TYM5 149 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 FAM72DQ6L9T8 149 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 Q6ZSR6 202 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 PHLDB2Q86SQ0 1253 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 FAM72BQ86X60 149 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 PHF13Q86YI8 300 aaPredicted RBP20.06■□□□□ 0.8
PRKCH-219ENST00000555906 C3orf20Q8ND61 904 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 DENND6BQ8NEG7 585 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 OR2AP1Q8NGE2 309 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 SELENOOQ9BVL4 669 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 OSBPL1AQ9BXW6 950 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 ADAM22Q9P0K1 906 aa20.06■□□□□ 0.8
PRKCH-219ENST00000555906 ZSCAN5CA6NGD5 496 aaPredicted RBP20.05■□□□□ 0.8
PRKCH-219ENST00000555906 LGALS16A8MUM7 142 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 TSPAN6O43657 245 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 CKMT1AP12532 417 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 GPD1P21695 349 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 ABL2P42684 1182 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 ABCG1P45844 678 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 RABIFP47224 123 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 COPB1P53618 953 aaKnown RBP20.05■□□□□ 0.8
PRKCH-219ENST00000555906 HNRNPKP61978 463 aaKnown RBP eCLIP20.05■□□□□ 0.8
PRKCH-219ENST00000555906 SNRPD1P62314 119 aaKnown RBP20.05■□□□□ 0.8
PRKCH-219ENST00000555906 SYCP1Q15431 976 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 CLEC16AQ2KHT3 1053 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 ZNF805Q5CZA5 627 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 PARGQ86W56 976 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 RYBPQ8N488 228 aaPredicted RBP20.05■□□□□ 0.8
PRKCH-219ENST00000555906 ANKRD20A12PQ8NF67 263 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 OR6K2Q8NGY2 324 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 ARHGEF26Q96DR7 871 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 BMFQ96LC9 184 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 LENG8Q96PV6 779 aaPredicted RBP20.05■□□□□ 0.8
PRKCH-219ENST00000555906 PCDHB18PQ96TA0 734 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 FANCLQ9NW38 375 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 DNAJC28Q9NX36 388 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 AK5Q9Y6K8 562 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 PTPRQQ9UMZ3 2332 aa20.05■□□□□ 0.8
PRKCH-219ENST00000555906 COL27A1Q8IZC6 1860 aaPredicted RBP20.05■□□□□ 0.8
PRKCH-219ENST00000555906 SPTY2D1-AS1A0A0U1RR47 76 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 POM121BA6NF01 834 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 NEMP2A6NFY4 417 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 C16orf96A6NNT2 1141 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 H3BM21 787 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 RAD51BO15315 384 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 NME1P15531 152 aaKnown RBP20.04■□□□□ 0.8
PRKCH-219ENST00000555906 RFC1P35251 1148 aaPredicted RBP20.04■□□□□ 0.8
PRKCH-219ENST00000555906 FZD2Q14332 565 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 MON1BQ7L1V2 547 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 FAM181AQ8N9Y4 354 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 NEK11Q8NG66 645 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 SNIP1Q8TAD8 396 aaKnown RBP20.04■□□□□ 0.8
PRKCH-219ENST00000555906 ASB12Q8WXK4 309 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 VOPP1Q96AW1 172 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 DCBLD2Q96PD2 775 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 KLF6Q99612 283 aaPredicted RBP20.04■□□□□ 0.8
PRKCH-219ENST00000555906 DUSP23Q9BVJ7 150 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 C1QTNF2Q9BXJ5 285 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 USP29Q9HBJ7 922 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 EVA1BQ9NVM1 165 aa20.04■□□□□ 0.8
PRKCH-219ENST00000555906 LIMA1Q9UHB6 759 aaKnown RBP20.04■□□□□ 0.8
PRKCH-219ENST00000555906 FPGTO14772 594 aa20.03■□□□□ 0.8
PRKCH-219ENST00000555906 SCAMP1O15126 338 aa20.03■□□□□ 0.8
PRKCH-219ENST00000555906 SPINT1O43278 529 aa20.03■□□□□ 0.8
PRKCH-219ENST00000555906 TLX3O43711 291 aaPredicted RBP20.03■□□□□ 0.8
PRKCH-219ENST00000555906 KDELR3O43731 214 aa20.03■□□□□ 0.8
PRKCH-219ENST00000555906 PAK4O96013 591 aaPredicted RBP20.03■□□□□ 0.8
PRKCH-219ENST00000555906 CSF2P04141 144 aa20.03■□□□□ 0.8
PRKCH-219ENST00000555906 UGT2B4P06133 528 aa20.03■□□□□ 0.8
PRKCH-219ENST00000555906 GP1BAP07359 652 aa20.03■□□□□ 0.8
PRKCH-219ENST00000555906 GKP32189 559 aa20.03■□□□□ 0.8
PRKCH-219ENST00000555906 MYL5Q02045 173 aa20.03■□□□□ 0.8
PRKCH-219ENST00000555906 SEMG2Q02383 582 aa20.03■□□□□ 0.8
PRKCH-219ENST00000555906 C1QBPQ07021 282 aaKnown RBP20.03■□□□□ 0.8
PRKCH-219ENST00000555906 ACAP1Q15027 740 aa20.03■□□□□ 0.8
PRKCH-219ENST00000555906 SOWAHCQ53LP3 525 aaPredicted RBP20.03■□□□□ 0.8
PRKCH-219ENST00000555906 EFHC2Q5JST6 749 aa20.03■□□□□ 0.8
PRKCH-219ENST00000555906 SLFN11Q7Z7L1 901 aa20.03■□□□□ 0.8
PRKCH-219ENST00000555906 RTL3Q8N8U3 475 aaKnown RBP20.03■□□□□ 0.8
PRKCH-219ENST00000555906 ZNF548Q8NEK5 533 aaPredicted RBP20.03■□□□□ 0.8
PRKCH-219ENST00000555906 CASKIN2Q8WXE0 1202 aa20.03■□□□□ 0.8
PRKCH-219ENST00000555906 GDAP1L1Q96MZ0 367 aa20.03■□□□□ 0.8
PRKCH-219ENST00000555906 ITM2BQ9Y287 266 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms